RNA–Protein interactions for RNA: ENST00000556240.1

GPHN-212, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-212ENST00000556240 F13A1P00488 732 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 PLCG1P19174 1290 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 VAMP1P23763 118 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 RNF34Q969K3 372 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 LIN37Q96GY3 246 aaPredicted RBP6.15□□□□□ -1.42
GPHN-212ENST00000556240 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 RHOVQ96L33 236 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 MIPEPQ99797 713 aa6.15□□□□□ -1.42
GPHN-212ENST00000556240 CARS2Q9HA77 564 aaKnown RBP6.15□□□□□ -1.42
GPHN-212ENST00000556240 FAM155AB1AL88 458 aaPredicted RBP6.14□□□□□ -1.43
GPHN-212ENST00000556240 SCAMP3O14828 347 aaKnown RBP6.14□□□□□ -1.43
GPHN-212ENST00000556240 SLITRK5O94991 958 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 CST3P01034 146 aaPredicted RBP6.14□□□□□ -1.43
GPHN-212ENST00000556240 ETV3P41162 512 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 AFMP43652 599 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 FBLN7Q53RD9 439 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 FYB2Q5VWT5 728 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 FAM196AQ6ZSG2 479 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 MRPL41Q8IXM3 137 aaKnown RBP6.14□□□□□ -1.43
GPHN-212ENST00000556240 TMEM87BQ96K49 555 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 HSPA12BQ96MM6 686 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 BACH2Q9BYV9 841 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 LMCD1Q9NZU5 365 aa6.14□□□□□ -1.43
GPHN-212ENST00000556240 FAM221AA4D161 298 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 PRR33A8MZF0 331 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.13□□□□□ -1.43
GPHN-212ENST00000556240 CDK8P49336 464 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 SFRP5Q5T4F7 317 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 PRAMEF13Q5VWM6 474 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 LETMD1Q6P1Q0 360 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 MCATQ8IVS2 390 aaKnown RBP6.13□□□□□ -1.43
GPHN-212ENST00000556240 MFSD4AQ8N468 514 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 BHLHE22Q8NFJ8 381 aaPredicted RBP6.13□□□□□ -1.43
GPHN-212ENST00000556240 FBRSQ9HAH7 460 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 ATP13A1Q9HD20 1204 aa6.13□□□□□ -1.43
GPHN-212ENST00000556240 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 SLBPQ14493 270 aaKnown RBP eCLIP6.12□□□□□ -1.43
GPHN-212ENST00000556240 NKG7Q16617 165 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 MPZL3Q6UWV2 235 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 REC114Q7Z4M0 266 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 USP48Q86UV5 1035 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 KIAA0825Q8IV33 1275 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 ZNF296Q8WUU4 475 aaPredicted RBP6.12□□□□□ -1.43
GPHN-212ENST00000556240 MRRFQ96E11 262 aaKnown RBP6.12□□□□□ -1.43
GPHN-212ENST00000556240 KIRREL1Q96J84 757 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 COPRSQ9NQ92 184 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 SEMA3GQ9NS98 782 aa6.12□□□□□ -1.43
GPHN-212ENST00000556240 CNTNAP4Q9C0A0 1308 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 H3BS24 57 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 TLR3O15455 904 aaKnown RBP6.11□□□□□ -1.43
GPHN-212ENST00000556240 GLI1P08151 1106 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 ZNF865P0CJ78 1059 aaPredicted RBP6.11□□□□□ -1.43
GPHN-212ENST00000556240 KIR3DL1P43629 444 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 RAP1GAPP47736 663 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 TNNI2P48788 182 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 XAGE3Q8WTP9 111 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 SPON2Q9BUD6 331 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 LRRC3Q9BY71 257 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 TJP2Q9UDY2 1190 aa6.11□□□□□ -1.43
GPHN-212ENST00000556240 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 ZNF165P49910 485 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 TMEM67Q5HYA8 995 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 TMEM201Q5SNT2 666 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 FBXL19Q6PCT2 694 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 PRR23BQ6ZRT6 265 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 NKD1Q969G9 470 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 ACSF2Q96CM8 615 aaPredicted RBP6.1□□□□□ -1.43
GPHN-212ENST00000556240 TOX2Q96NM4 488 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 KCNQ5Q9NR82 932 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 REV1Q9UBZ9 1251 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 KLHL3Q9UH77 587 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 CAPN6Q9Y6Q1 641 aa6.1□□□□□ -1.43
GPHN-212ENST00000556240 HTR3BO95264 441 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 TSPAN15O95858 294 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 MCM4P33991 863 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 GDNFP39905 211 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 LRRFIP1Q32MZ4 808 aaKnown RBP6.09□□□□□ -1.43
GPHN-212ENST00000556240 SYDE1Q6ZW31 735 aaPredicted RBP6.09□□□□□ -1.43
GPHN-212ENST00000556240 RGS22Q8NE09 1264 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 RIN3Q8TB24 985 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 CYB5D2Q8WUJ1 264 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 DPH2Q9BQC3 489 aaPredicted RBP6.09□□□□□ -1.43
GPHN-212ENST00000556240 NT5C1AQ9BXI3 368 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 ST14Q9Y5Y6 855 aa6.09□□□□□ -1.43
GPHN-212ENST00000556240 PRR36Q9H6K5 1346 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 GREM1O60565 184 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 CBX7O95931 251 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 GARTP22102 1010 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 FANCCQ00597 558 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 CILP2Q8IUL8 1156 aa6.08□□□□□ -1.44
GPHN-212ENST00000556240 SLFN12Q8IYM2 578 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms