RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 POLR3GO15318 223 aaPredicted RBP16.83■□□□□ 0.28
NEK9-209ENST00000556170 ASIC1P78348 528 aa16.83■□□□□ 0.28
NEK9-209ENST00000556170 TRMT1LQ7Z2T5 733 aaKnown RBP16.83■□□□□ 0.28
NEK9-209ENST00000556170 CAMTA1Q9Y6Y1 1673 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 KLRK1P26718 216 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 TMCO3Q6UWJ1 677 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 KIAA1328Q86T90 577 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 SLC44A5Q8NCS7 719 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 ZC3H12CQ9C0D7 883 aaKnown RBP16.82■□□□□ 0.28
NEK9-209ENST00000556170 NALCNQ8IZF0 1738 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 USP17L3A6NCW0 530 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 USP17L4A6NCW7 530 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 ERICH4A6NGS2 130 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 EPS15P42566 896 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 TNNI2P48788 182 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 DNA2P51530 1060 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 INF2Q27J81 1249 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 USP17L1Q7RTZ2 530 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 BSDC1Q9NW68 430 aaPredicted RBP16.82■□□□□ 0.28
NEK9-209ENST00000556170 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 STAG1Q8WVM7 1258 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
NEK9-209ENST00000556170 FOXP1Q9H334 677 aaPredicted RBP16.82■□□□□ 0.28
NEK9-209ENST00000556170 TAB2Q9NYJ8 693 aa16.82■□□□□ 0.28
NEK9-209ENST00000556170 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 GNAQP50148 359 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 SKIDA1Q1XH10 827 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 WDR66Q8TBY9 1149 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 IMPACTQ9P2X3 320 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 XRN1Q8IZH2 1706 aaKnown RBP16.81■□□□□ 0.28
NEK9-209ENST00000556170 SCG2P13521 617 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 MFSD14BQ5SR56 506 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 RNF26Q9BY78 433 aaPredicted RBP16.81■□□□□ 0.28
NEK9-209ENST00000556170 AGXT2Q9BYV1 514 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 SGMS1Q86VZ5 419 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 MROH7-TTC4A0A0A0MT08 1334 aa16.81■□□□□ 0.28
NEK9-209ENST00000556170 GTF2IP78347 998 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 UBXN1Q04323 297 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 ERCC6LQ2NKX8 1250 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
NEK9-209ENST00000556170 CCDC148Q8NFR7 591 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 CARD6Q9BX69 1037 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 MAN1B1Q9UKM7 699 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 NTSR2O95665 410 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 AXDND1Q5T1B0 1012 aaPredicted RBP16.8■□□□□ 0.28
NEK9-209ENST00000556170 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
NEK9-209ENST00000556170 TRIM21P19474 475 aaKnown RBP16.8■□□□□ 0.28
NEK9-209ENST00000556170 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 DPF2Q92785 391 aa16.8■□□□□ 0.28
NEK9-209ENST00000556170 CCNT1O60563 726 aaKnown RBP16.79■□□□□ 0.28
NEK9-209ENST00000556170 TXKP42681 527 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 ADGRA1Q86SQ6 560 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 FAM208AQ9UK61 1670 aaKnown RBP16.79■□□□□ 0.28
NEK9-209ENST00000556170 RGPD2P0DJD1 1756 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 ALX1Q15699 326 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 GGA1Q9UJY5 639 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 AKR1B15C9JRZ8 316 aaPredicted RBP16.79■□□□□ 0.28
NEK9-209ENST00000556170 PARP1P09874 1014 aaKnown RBP16.79■□□□□ 0.28
NEK9-209ENST00000556170 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 CALML4Q96GE6 196 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 RESP18Q5W5W9 173 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
NEK9-209ENST00000556170 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
NEK9-209ENST00000556170 CCDC175P0C221 793 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 SLF2Q8IX21 1173 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
NEK9-209ENST00000556170 BMP2KQ9NSY1 1161 aaPredicted RBP16.78■□□□□ 0.28
NEK9-209ENST00000556170 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 PTPREP23469 700 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
NEK9-209ENST00000556170 BLIDQ8IZY5 108 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 EYA3Q99504 573 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
NEK9-209ENST00000556170 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 ABCC12Q96J65 1359 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 PSMA7O14818 248 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 TCP10Q12799 353 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 SARM1Q6SZW1 724 aa16.78■□□□□ 0.28
NEK9-209ENST00000556170 PPP1R1BQ9UD71 204 aaPredicted RBP16.78■□□□□ 0.28
NEK9-209ENST00000556170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.28
NEK9-209ENST00000556170 SCNN1DP51172 638 aa16.77■□□□□ 0.28
NEK9-209ENST00000556170 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.28
NEK9-209ENST00000556170 FERMT2Q96AC1 680 aa16.77■□□□□ 0.28
NEK9-209ENST00000556170 TIGD1Q96MW7 591 aa16.77■□□□□ 0.28
NEK9-209ENST00000556170 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
NEK9-209ENST00000556170 ATP8A2Q9NTI2 1148 aa16.77■□□□□ 0.28
NEK9-209ENST00000556170 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
NEK9-209ENST00000556170 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.27
NEK9-209ENST00000556170 BTDP43251 543 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms