RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 BRCA2P51587 3418 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 COL11A1P12107 1806 aaPredicted RBP4.69□□□□□ -1.66
LINC00648-202ENST00000555985 FAM196BA6NMK8 535 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 POTEB2H3BUK9 544 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 ALDH1A1P00352 501 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 TPM2P07951 284 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 CETPP11597 493 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 ALX1Q15699 326 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 C17orf99Q6UX52 265 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 PROCA1Q8NCQ7 364 aaPredicted RBP4.69□□□□□ -1.66
LINC00648-202ENST00000555985 SDR42E1Q8WUS8 393 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 GPATCH3Q96I76 525 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 CRNKL1Q9BZJ0 848 aaKnown RBP4.69□□□□□ -1.66
LINC00648-202ENST00000555985 NBPF3Q9H094 633 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 ANAPC4Q9UJX5 808 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 CSADQ9Y600 493 aa4.69□□□□□ -1.66
LINC00648-202ENST00000555985 TNRC18O15417 2968 aaPredicted RBP4.69□□□□□ -1.66
LINC00648-202ENST00000555985 IGHA2P01877 340 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 CYP2D6P10635 497 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 BCRP11274 1271 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 XRCC6P12956 609 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 CTGFP29279 349 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 HOXA7P31268 230 aaPredicted RBP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 CRHR2Q13324 411 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 SNAPC2Q13487 334 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 TTLL12Q14166 644 aaPredicted RBP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 SEC62Q99442 399 aaKnown RBP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 LNPKQ9C0E8 428 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 IL25Q9H293 177 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 HELLSQ9NRZ9 838 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 SERPINB13Q9UIV8 391 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 ZBTB21Q9ULJ3 1066 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 FRMPD3Q5JV73 1810 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 A0A0D9SFI3 127 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 PATL2C9JE40 543 aaKnown RBP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 GPR25O00155 361 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 GPAA1O43292 621 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 PDIA4P13667 645 aaKnown RBP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 TTC22Q5TAA0 569 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 POTEGQ6S5H5 508 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 LBX2Q6XYB7 198 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 OTUD5Q96G74 571 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 SWAP70Q9UH65 585 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 SAP30BPQ9UHR5 308 aaKnown RBP4.68□□□□□ -1.66
LINC00648-202ENST00000555985 CENPFP49454 3210 aa4.68□□□□□ -1.66
LINC00648-202ENST00000555985 CCL15-CCL14A0A0B4J2E2 113 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 TLR2O60603 784 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 TRPA1O75762 1119 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 GNAT2P19087 354 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 CCL15Q16663 113 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 KIAA1755Q5JYT7 1200 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 TREML2Q5T2D2 321 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 TTC6Q86TZ1 520 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ZNF280CQ8ND82 737 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ZNF296Q8WUU4 475 aaPredicted RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 AIDAQ96BJ3 306 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 NOL10Q9BSC4 688 aaKnown RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 EMILIN3Q9NT22 766 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ARPP21Q9UBL0 812 aaPredicted RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 AGTPBP1Q9UPW5 1226 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ZHX2Q9Y6X8 837 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 LCTP09848 1927 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 LRRC37A2A6NM11 1700 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 CYP2D7A0A087X1C5 515 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 A0A1W2PRG0 241 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 USP17L5A8MUK1 530 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 TBC1D8O95759 1140 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ASNSP08243 561 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 SDSP20132 328 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 RASA1P20936 1047 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 BACE1P56817 501 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 MKRN3Q13064 507 aaKnown RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 VPS53Q5VIR6 699 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ZNF589Q86UQ0 364 aaPredicted RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 NKX2-3Q8TAU0 364 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 FAM227BQ96M60 508 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 PHF12Q96QT6 1004 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 KIAA1683Q9H0B3 1180 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 TSKSQ9UJT2 592 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 USP17L12C9JPN9 530 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 USP17L21D6R901 530 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 PDHXO00330 501 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 CNMDO75829 334 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 HLA-DOAP06340 250 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 USP5P45974 858 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 CDK8P49336 464 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 DGKZQ13574 1117 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 FASTKD5Q7L8L6 764 aaKnown RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 CCDC84Q86UT8 332 aaPredicted RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 IFNL3Q8IZI9 196 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 SLC44A5Q8NCS7 719 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 DYNLL2Q96FJ2 89 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 MORF4L1Q9UBU8 362 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 CIZ1Q9ULV3 898 aaPredicted RBP4.67□□□□□ -1.66
LINC00648-202ENST00000555985 SYNPO2Q9UMS6 1093 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 ADAMTS5Q9UNA0 930 aa4.67□□□□□ -1.66
LINC00648-202ENST00000555985 SLC4A4Q9Y6R1 1079 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms