RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 FXR1P51114 621 aaKnown RBP eCLIP23.89■■□□□ 1.41
PRKCH-219ENST00000555906 TRIB2Q92519 343 aa23.89■■□□□ 1.41
PRKCH-219ENST00000555906 NUDT12Q9BQG2 462 aa23.89■■□□□ 1.41
PRKCH-219ENST00000555906 CABP5Q9NP86 173 aa23.89■■□□□ 1.41
PRKCH-219ENST00000555906 FRMPD3Q5JV73 1810 aa23.89■■□□□ 1.41
PRKCH-219ENST00000555906 RPTORQ8N122 1335 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L15C9J2P7 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L13C9JLJ4 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L11C9JVI0 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L18D6R9N7 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L22D6RA61 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L17D6RBQ6 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L19D6RCP7 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L20D6RJB6 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 PEX10O60683 326 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 XRCC5P13010 732 aaKnown RBP23.88■■□□□ 1.41
PRKCH-219ENST00000555906 VCAM1P19320 739 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 USP17L24Q0WX57 530 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 PDE3AQ14432 1141 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 ZYXQ15942 572 aaKnown RBP23.88■■□□□ 1.41
PRKCH-219ENST00000555906 PAGR1Q9BTK6 254 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 PAG1Q9NWQ8 432 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 MCM9Q9NXL9 1143 aa23.88■■□□□ 1.41
PRKCH-219ENST00000555906 LCORLQ8N3X6 602 aa23.87■■□□□ 1.41
PRKCH-219ENST00000555906 ANKLE1Q8NAG6 615 aa23.87■■□□□ 1.41
PRKCH-219ENST00000555906 EDC3Q96F86 508 aaKnown RBP23.87■■□□□ 1.41
PRKCH-219ENST00000555906 PORCNQ9H237 461 aa23.87■■□□□ 1.41
PRKCH-219ENST00000555906 HMX1Q9NP08 348 aaPredicted RBP23.87■■□□□ 1.41
PRKCH-219ENST00000555906 DCP1AQ9NPI6 582 aaPredicted RBP23.87■■□□□ 1.41
PRKCH-219ENST00000555906 NR2E3Q9Y5X4 410 aa23.87■■□□□ 1.41
PRKCH-219ENST00000555906 ZNF236Q9UL36 1845 aa23.87■■□□□ 1.41
PRKCH-219ENST00000555906 ATP5JP18859 108 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 GUCY1A2P33402 732 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 TRIM32Q13049 653 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 MAP3K21Q5TCX8 1036 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 POTEEQ6S8J3 1075 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 CHRDL2Q6WN34 429 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 GPR142Q7Z601 462 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 TRMT44Q8IYL2 757 aaKnown RBP23.86■■□□□ 1.41
PRKCH-219ENST00000555906 ACER1Q8TDN7 264 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 SDR42E1Q8WUS8 393 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 RABGAP1Q9Y3P9 1069 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 RLFQ13129 1914 aa23.86■■□□□ 1.41
PRKCH-219ENST00000555906 PARP14Q460N5 1801 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 CYP2B6P20813 491 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 ADD2P35612 726 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 Q3C1V9 767 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 LBX2Q6XYB7 198 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 CATSPERGQ6ZRH7 1159 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 CCAR1Q8IX12 1150 aaKnown RBP23.85■■□□□ 1.41
PRKCH-219ENST00000555906 USP6NLQ92738 828 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 HAUS7Q99871 368 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.85■■□□□ 1.41
PRKCH-219ENST00000555906 BOLA2Q9H3K6 86 aa23.85■■□□□ 1.41
PRKCH-219ENST00000555906 CNMDO75829 334 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 ZKSCAN1P17029 563 aaPredicted RBP23.84■■□□□ 1.41
PRKCH-219ENST00000555906 RGS2P41220 211 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 CCNA1P78396 465 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 MORN1Q5T089 497 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 PLEKHH3Q7Z736 793 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 APBA2Q99767 749 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 SWAP70Q9UH65 585 aa23.84■■□□□ 1.41
PRKCH-219ENST00000555906 PRKAR2AP13861 404 aaKnown RBP23.83■■□□□ 1.41
PRKCH-219ENST00000555906 EVX2Q03828 476 aa23.83■■□□□ 1.41
PRKCH-219ENST00000555906 SEPT2Q15019 361 aa23.83■■□□□ 1.41
PRKCH-219ENST00000555906 NECAB2Q7Z6G3 386 aa23.83■■□□□ 1.41
PRKCH-219ENST00000555906 PAWRQ96IZ0 340 aaKnown RBP23.83■■□□□ 1.41
PRKCH-219ENST00000555906 LRRCC1Q9C099 1032 aa23.83■■□□□ 1.41
PRKCH-219ENST00000555906 BCL11AQ9H165 835 aa23.83■■□□□ 1.41
PRKCH-219ENST00000555906 ARMT1Q9H993 441 aa23.83■■□□□ 1.41
PRKCH-219ENST00000555906 MBD4O95243 580 aa23.82■■□□□ 1.4
PRKCH-219ENST00000555906 C20orf194Q5TEA3 1177 aa23.82■■□□□ 1.4
PRKCH-219ENST00000555906 DIS3LQ8TF46 1054 aaKnown RBP23.82■■□□□ 1.4
PRKCH-219ENST00000555906 RPAP3Q9H6T3 665 aaPredicted RBP23.82■■□□□ 1.4
PRKCH-219ENST00000555906 ATP8A2Q9NTI2 1148 aa23.82■■□□□ 1.4
PRKCH-219ENST00000555906 SPDYE16A6NNV3 312 aaPredicted RBP23.81■■□□□ 1.4
PRKCH-219ENST00000555906 MPHOSPH10O00566 681 aaKnown RBP23.81■■□□□ 1.4
PRKCH-219ENST00000555906 EVI5O60447 810 aa23.81■■□□□ 1.4
PRKCH-219ENST00000555906 CYP2D6P10635 497 aa23.81■■□□□ 1.4
PRKCH-219ENST00000555906 TMEM179Q6ZVK1 233 aa23.81■■□□□ 1.4
PRKCH-219ENST00000555906 PRO3102Q9H379 93 aa23.81■■□□□ 1.4
PRKCH-219ENST00000555906 CWC22Q9HCG8 908 aaKnown RBP23.81■■□□□ 1.4
PRKCH-219ENST00000555906 OGDHLQ9ULD0 1010 aa23.81■■□□□ 1.4
PRKCH-219ENST00000555906 SZT2Q5T011 3432 aa23.81■■□□□ 1.4
PRKCH-219ENST00000555906 GLRX3O76003 335 aaKnown RBP23.8■■□□□ 1.4
PRKCH-219ENST00000555906 UBE3CQ15386 1083 aa23.8■■□□□ 1.4
PRKCH-219ENST00000555906 SLC44A5Q8NCS7 719 aa23.8■■□□□ 1.4
PRKCH-219ENST00000555906 RBM27Q9P2N5 1060 aaKnown RBP23.8■■□□□ 1.4
PRKCH-219ENST00000555906 GREB1LQ9C091 1923 aaPredicted RBP23.79■■□□□ 1.4
PRKCH-219ENST00000555906 A0A1W2PRG0 241 aa23.79■■□□□ 1.4
PRKCH-219ENST00000555906 MAP2K5Q13163 448 aa23.79■■□□□ 1.4
PRKCH-219ENST00000555906 SLFNL1Q499Z3 407 aa23.79■■□□□ 1.4
PRKCH-219ENST00000555906 PRKAB2O43741 272 aa23.78■■□□□ 1.4
PRKCH-219ENST00000555906 MNX1P50219 401 aaPredicted RBP23.78■■□□□ 1.4
PRKCH-219ENST00000555906 CCL14Q16627 93 aa23.78■■□□□ 1.4
PRKCH-219ENST00000555906 ZSCAN25Q6NSZ9 544 aa23.78■■□□□ 1.4
PRKCH-219ENST00000555906 AMOTL1Q8IY63 956 aa23.78■■□□□ 1.4
PRKCH-219ENST00000555906 NBPF3Q9H094 633 aa23.78■■□□□ 1.4
PRKCH-219ENST00000555906 BTBD7Q9P203 1132 aa23.78■■□□□ 1.4
PRKCH-219ENST00000555906 CACNB2Q08289 660 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms