RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 C21orf62-AS1Q17RA5 79 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 DUOXA2Q1HG44 320 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 TDRD10Q5VZ19 366 aaKnown RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 HEATR6Q6AI08 1181 aaKnown RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 Q6ZNB5 142 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CDC37L1Q7L3B6 337 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 DHX37Q8IY37 1157 aaKnown RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 UBASH3BQ8TF42 649 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CHAC2Q8WUX2 184 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 STAG1Q8WVM7 1258 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 KISS1RQ969F8 398 aaPredicted RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 EXOC2Q96KP1 924 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 IPO9Q96P70 1041 aaKnown RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 FANCD2OSQ96PS1 177 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CDC6Q99741 560 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 HAUS7Q99871 368 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 AARSD1Q9BTE6 412 aaKnown RBP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 DHRS4Q9BTZ2 278 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 RUSC1Q9BVN2 902 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 FBRSQ9HAH7 460 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 CYP4F12Q9HCS2 524 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 ARHGEF4Q9NR80 690 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 DISC1Q9NRI5 854 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 SUSD2Q9UGT4 822 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 AP4E1Q9UPM8 1137 aa4.17□□□□□ -1.74
MTHFD1-212ENST00000555858 TRBV23-1A0A0A0MS06 115 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 IRS4O14654 1257 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 CST3P01034 146 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 S100BP04271 92 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 TP53P04637 393 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 EPHX1P07099 455 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 PDGFRBP09619 1106 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 BCRP11274 1271 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 ADH5P11766 374 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 MYCLP1P12525 358 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 CNGA1P29973 690 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 L1CAMP32004 1257 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 SOX5P35711 763 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 STAT3P40763 770 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 KRT76Q01546 638 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 TTLL4Q14679 1199 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 NKG7Q16617 165 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 FNDC3BQ53EP0 1204 aaKnown RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 TRAPPC3LQ5T215 181 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 CCDC181Q5TID7 509 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 FOXB2Q5VYV0 432 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 NUTM2GQ5VZR2 741 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 FBXO11Q86XK2 927 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 THNSL2Q86YJ6 484 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 SCUBE1Q8IWY4 988 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 BAHD1Q8TBE0 780 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 CYB5D2Q8WUJ1 264 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 DPH2Q9BQC3 489 aaPredicted RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 KLHL25Q9H0H3 589 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 RNF208Q9H0X6 261 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 CAAP1Q9H8G2 361 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 SUGCTQ9HAC7 445 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 NCOA5Q9HCD5 579 aaKnown RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 LRP2BPQ9P2M1 347 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 ATP8A1Q9Y2Q0 1164 aa4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 MRPS23Q9Y3D9 190 aaKnown RBP4.16□□□□□ -1.74
MTHFD1-212ENST00000555858 A0A087X0B3 334 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 SPDYE3A6NKU9 549 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 SHISA8B8ZZ34 492 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 C9IYK1 514 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 DLL1O00548 723 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 LCE2BO14633 110 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 CBFA2T2O43439 604 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 KCNQ2O43526 872 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 PARNO95453 639 aaKnown RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 NEFMP07197 916 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 RAC1P63000 192 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 PPP2R2AP63151 447 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 SOX4Q06945 474 aaPredicted RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 SLBPQ14493 270 aaKnown RBP eCLIP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 CBX2Q14781 532 aaPredicted RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 FAM209AQ5JX71 171 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 AXDND1Q5T1B0 1012 aaPredicted RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 PRAMEF13Q5VWM6 474 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 FERMT3Q86UX7 667 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 ZNF227Q86WZ6 799 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 CCDC144CPQ8IYA2 1237 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 FMR1NBQ8N0W7 255 aaPredicted RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 SMG8Q8ND04 991 aaKnown RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 LRRN4CLQ8ND94 238 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 SLC16A10Q8TF71 515 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 PPP1R14AQ96A00 147 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 MRPL4Q9BYD3 311 aaKnown RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 GBP3Q9H0R5 595 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 GSX1Q9H4S2 264 aaPredicted RBP4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 PIDD1Q9HB75 910 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 HOMER2Q9NSB8 354 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 FAM86C1Q9NVL1 165 aa4.15□□□□□ -1.75
MTHFD1-212ENST00000555858 DNAJC25-GNG10A0A024R161 153 aa4.14□□□□□ -1.75
MTHFD1-212ENST00000555858 A0A0A0MRY4 1105 aa4.14□□□□□ -1.75
MTHFD1-212ENST00000555858 PDE8AO60658 829 aa4.14□□□□□ -1.75
MTHFD1-212ENST00000555858 RNGTTO60942 597 aaKnown RBP4.14□□□□□ -1.75
MTHFD1-212ENST00000555858 PPM1BO75688 479 aa4.14□□□□□ -1.75
MTHFD1-212ENST00000555858 LRIG2O94898 1065 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms