RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 UBE4AQ14139 1066 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 ARHGAP29Q52LW3 1261 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 SPECC1Q5M775 1068 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 TAF3Q5VWG9 929 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 ZKSCAN3Q9BRR0 538 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 TUBB2BQ9BVA1 445 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 SEC31BQ9NQW1 1179 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 CICQ96RK0 1608 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-209ENST00000555609 AKR1B15C9JRZ8 316 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-209ENST00000555609 URI1O94763 535 aaPredicted RBP18.42■□□□□ 0.54
TUBB3-209ENST00000555609 NTSR2O95665 410 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 TRAPPC10P48553 1259 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 TUBB4BP68371 445 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 FUT2Q10981 343 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 IQCA1Q86XH1 822 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 CCDC51Q96ER9 411 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
TUBB3-209ENST00000555609 TERF2Q15554 542 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 PKN1Q16512 942 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 FILIP1LQ4L180 1135 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 PDILTQ8N807 584 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 RGL2O15211 777 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 CLCN6P51797 869 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 TMCO3Q6UWJ1 677 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 GPR161Q8N6U8 529 aaKnown RBP18.41■□□□□ 0.54
TUBB3-209ENST00000555609 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 ZNF446Q9NWS9 450 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
TUBB3-209ENST00000555609 ZBTB22O15209 634 aa18.4■□□□□ 0.54
TUBB3-209ENST00000555609 IFIT1BQ5T764 474 aaKnown RBP18.4■□□□□ 0.54
TUBB3-209ENST00000555609 MIGA1Q8NAN2 632 aa18.4■□□□□ 0.54
TUBB3-209ENST00000555609 PAGE5Q96GU1 130 aa18.4■□□□□ 0.54
TUBB3-209ENST00000555609 RIOK1Q9BRS2 568 aaKnown RBP18.4■□□□□ 0.54
TUBB3-209ENST00000555609 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-209ENST00000555609 PDS5AQ29RF7 1337 aaKnown RBP18.4■□□□□ 0.54
TUBB3-209ENST00000555609 MINDY4BA8MYZ0 360 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 IGSF3O75054 1194 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.54
TUBB3-209ENST00000555609 GNG11P61952 73 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 CUL4BQ13620 913 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 CDKAL1Q5VV42 579 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 JAKMIP3Q5VZ66 844 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 ZNF771Q7L3S4 317 aaPredicted RBP18.39■□□□□ 0.54
TUBB3-209ENST00000555609 PPFIBP1Q86W92 1011 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 ENAHQ8N8S7 591 aaPredicted RBP18.39■□□□□ 0.54
TUBB3-209ENST00000555609 SYTL4Q96C24 671 aaPredicted RBP18.39■□□□□ 0.54
TUBB3-209ENST00000555609 ITIH6Q6UXX5 1313 aa18.39■□□□□ 0.54
TUBB3-209ENST00000555609 CCDC175P0C221 793 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 PBX1P40424 430 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 CRKLP46109 303 aaKnown RBP18.39■□□□□ 0.53
TUBB3-209ENST00000555609 DPYDQ12882 1025 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 CLEC4GQ6UXB4 293 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 MED15Q96RN5 788 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 MRFAP1Q9Y605 127 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 FHOD1Q9Y613 1164 aa18.39■□□□□ 0.53
TUBB3-209ENST00000555609 ORC4O43929 436 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 SPAG1Q07617 926 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 SF3B3Q15393 1217 aaKnown RBP18.38■□□□□ 0.53
TUBB3-209ENST00000555609 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 APTXQ7Z2E3 356 aaKnown RBP18.38■□□□□ 0.53
TUBB3-209ENST00000555609 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 TNFRSF25Q93038 417 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 DHX58Q96C10 678 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 CARD6Q9BX69 1037 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
TUBB3-209ENST00000555609 SAMSN1Q9NSI8 373 aaKnown RBP18.38■□□□□ 0.53
TUBB3-209ENST00000555609 NIP7Q9Y221 180 aaKnown RBP eCLIP18.38■□□□□ 0.53
TUBB3-209ENST00000555609 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
TUBB3-209ENST00000555609 SYNRGQ9UMZ2 1314 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 SNAP23O00161 211 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 FECHP22830 423 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 TROAPQ12815 778 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 POTEAQ6S8J7 498 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 RABGGTAQ92696 567 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 BSDC1Q9NW68 430 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 VPS54Q9P1Q0 977 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 USP21Q9UK80 565 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 WNK3Q9BYP7 1800 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 ADKP55263 362 aaKnown RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 TTC38Q5R3I4 469 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 CNGA4Q8IV77 575 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 IQUBQ8NA54 791 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 SYMPKQ92797 1274 aaKnown RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 KIFC2Q96AC6 838 aa18.37■□□□□ 0.53
TUBB3-209ENST00000555609 ZHX1Q9UKY1 873 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
TUBB3-209ENST00000555609 LRRC10BA6NIK2 292 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-209ENST00000555609 TRIM14Q14142 442 aa18.36■□□□□ 0.53
TUBB3-209ENST00000555609 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms