RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 ZMYM6O95789 1325 aa24.38■■□□□ 1.49
FOXN3-209ENST00000555353 LOC285556D6RIA3 1793 aa24.38■■□□□ 1.49
FOXN3-209ENST00000555353 RASA1P20936 1047 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 SH3D19Q5HYK7 790 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 GPAT2Q6NUI2 795 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 ZNF444Q8N0Y2 327 aaPredicted RBP24.37■■□□□ 1.49
FOXN3-209ENST00000555353 R3HDMLQ9H3Y0 253 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 AGTPBP1Q9UPW5 1226 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 GPR25O00155 361 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 PRDM1O75626 825 aa24.37■■□□□ 1.49
FOXN3-209ENST00000555353 NOM1Q5C9Z4 860 aaKnown RBP24.37■■□□□ 1.49
FOXN3-209ENST00000555353 CTDSPL2Q05D32 466 aa24.36■■□□□ 1.49
FOXN3-209ENST00000555353 PARK7Q99497 189 aaKnown RBP24.36■■□□□ 1.49
FOXN3-209ENST00000555353 ANAPC4Q9UJX5 808 aa24.36■■□□□ 1.49
FOXN3-209ENST00000555353 SLC45A1Q9Y2W3 748 aa24.36■■□□□ 1.49
FOXN3-209ENST00000555353 EIF5BO60841 1220 aaKnown RBP24.35■■□□□ 1.49
FOXN3-209ENST00000555353 USP14P54578 494 aa24.35■■□□□ 1.49
FOXN3-209ENST00000555353 ICA1Q05084 483 aa24.35■■□□□ 1.49
FOXN3-209ENST00000555353 TREML2Q5T2D2 321 aa24.35■■□□□ 1.49
FOXN3-209ENST00000555353 USP17L2Q6R6M4 530 aa24.35■■□□□ 1.49
FOXN3-209ENST00000555353 DSCC1Q9BVC3 393 aa24.35■■□□□ 1.49
FOXN3-209ENST00000555353 PABPC4Q13310 644 aaKnown RBP eCLIP24.34■■□□□ 1.49
FOXN3-209ENST00000555353 DGKZQ13574 1117 aa24.34■■□□□ 1.49
FOXN3-209ENST00000555353 ZYXQ15942 572 aaKnown RBP24.34■■□□□ 1.49
FOXN3-209ENST00000555353 ACER1Q8TDN7 264 aa24.34■■□□□ 1.49
FOXN3-209ENST00000555353 KIAA1683Q9H0B3 1180 aa24.34■■□□□ 1.49
FOXN3-209ENST00000555353 IL25Q9H293 177 aa24.34■■□□□ 1.49
FOXN3-209ENST00000555353 KANSL2Q9H9L4 492 aa24.34■■□□□ 1.49
FOXN3-209ENST00000555353 ARHGEF10LQ9HCE6 1279 aa24.34■■□□□ 1.49
FOXN3-209ENST00000555353 TLR2O60603 784 aa24.33■■□□□ 1.49
FOXN3-209ENST00000555353 ZNF296Q8WUU4 475 aaPredicted RBP24.33■■□□□ 1.49
FOXN3-209ENST00000555353 PNMA3Q9UL41 463 aa24.33■■□□□ 1.49
FOXN3-209ENST00000555353 GREB1LQ9C091 1923 aaPredicted RBP24.33■■□□□ 1.49
FOXN3-209ENST00000555353 FKTNO75072 461 aa24.33■■□□□ 1.48
FOXN3-209ENST00000555353 HAND2P61296 217 aa24.33■■□□□ 1.48
FOXN3-209ENST00000555353 CLEC10AQ8IUN9 316 aa24.33■■□□□ 1.48
FOXN3-209ENST00000555353 SH2D4AQ9H788 454 aa24.33■■□□□ 1.48
FOXN3-209ENST00000555353 EMILIN3Q9NT22 766 aa24.33■■□□□ 1.48
FOXN3-209ENST00000555353 CTNNA3Q9UI47 895 aa24.33■■□□□ 1.48
FOXN3-209ENST00000555353 LAMA4Q16363 1823 aa24.32■■□□□ 1.48
FOXN3-209ENST00000555353 TSPY3P0CV98 308 aa24.32■■□□□ 1.48
FOXN3-209ENST00000555353 TSPY8P0CW00 308 aa24.32■■□□□ 1.48
FOXN3-209ENST00000555353 CYP2C8P10632 490 aa24.32■■□□□ 1.48
FOXN3-209ENST00000555353 ATP2B2Q01814 1243 aa24.32■■□□□ 1.48
FOXN3-209ENST00000555353 COL13A1Q5TAT6 717 aaPredicted RBP24.32■■□□□ 1.48
FOXN3-209ENST00000555353 SMCR8Q8TEV9 937 aaPredicted RBP24.32■■□□□ 1.48
FOXN3-209ENST00000555353 ZNF213O14771 459 aa24.31■■□□□ 1.48
FOXN3-209ENST00000555353 SGSM2O43147 1006 aa24.31■■□□□ 1.48
FOXN3-209ENST00000555353 TOMM22Q9NS69 142 aa24.31■■□□□ 1.48
FOXN3-209ENST00000555353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.31■■□□□ 1.48
FOXN3-209ENST00000555353 A0A1W2PRG0 241 aa24.3■■□□□ 1.48
FOXN3-209ENST00000555353 EEF2P13639 858 aaKnown RBP24.3■■□□□ 1.48
FOXN3-209ENST00000555353 OSBPP22059 807 aa24.3■■□□□ 1.48
FOXN3-209ENST00000555353 C12orf42Q96LP6 360 aa24.3■■□□□ 1.48
FOXN3-209ENST00000555353 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
FOXN3-209ENST00000555353 IRX3P78415 501 aaPredicted RBP24.29■■□□□ 1.48
FOXN3-209ENST00000555353 TFAP4Q01664 338 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 SP3Q02447 781 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 IMMTQ16891 758 aaKnown RBP24.29■■□□□ 1.48
FOXN3-209ENST00000555353 C8orf34Q49A92 452 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 FAM47AQ5JRC9 791 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 INCENPQ9NQS7 918 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 MYH4Q9Y623 1939 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 TSPY2A6NKD2 308 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 ORC4O43929 436 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 RANBP6O60518 1105 aaKnown RBP24.29■■□□□ 1.48
FOXN3-209ENST00000555353 PCP11498 1178 aaKnown RBP24.29■■□□□ 1.48
FOXN3-209ENST00000555353 MFSD6Q6ZSS7 791 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 SIAH1Q8IUQ4 282 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 NEDD1Q8NHV4 660 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 RNF41Q9H4P4 317 aaPredicted RBP24.29■■□□□ 1.48
FOXN3-209ENST00000555353 CPA4Q9UI42 421 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 TMX2Q9Y320 296 aa24.29■■□□□ 1.48
FOXN3-209ENST00000555353 HOXA7P31268 230 aaPredicted RBP24.28■■□□□ 1.48
FOXN3-209ENST00000555353 RRP12Q5JTH9 1297 aaKnown RBP24.28■■□□□ 1.48
FOXN3-209ENST00000555353 AKNAD1Q5T1N1 836 aa24.28■■□□□ 1.48
FOXN3-209ENST00000555353 KIAA1211Q6ZU35 1233 aa24.28■■□□□ 1.48
FOXN3-209ENST00000555353 ASCC2Q9H1I8 757 aaPredicted RBP24.28■■□□□ 1.48
FOXN3-209ENST00000555353 PLIN4Q96Q06 1357 aa24.28■■□□□ 1.48
FOXN3-209ENST00000555353 FGRP09769 529 aa24.27■■□□□ 1.48
FOXN3-209ENST00000555353 VCAM1P19320 739 aa24.27■■□□□ 1.48
FOXN3-209ENST00000555353 STAG1Q8WVM7 1258 aa24.27■■□□□ 1.48
FOXN3-209ENST00000555353 ERO1AQ96HE7 468 aa24.27■■□□□ 1.48
FOXN3-209ENST00000555353 ESYT1Q9BSJ8 1104 aa24.27■■□□□ 1.48
FOXN3-209ENST00000555353 ADGRA2Q96PE1 1338 aa24.27■■□□□ 1.47
FOXN3-209ENST00000555353 C17orf99Q6UX52 265 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 TBC1D10CQ8IV04 446 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 LPAR1Q92633 364 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 CEP95Q96GE4 821 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 NBPF3Q9H094 633 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 VCPKMTQ9H867 229 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 GOPCQ9HD26 462 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 NYAP2Q9P242 653 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 TACC3Q9Y6A5 838 aa24.26■■□□□ 1.47
FOXN3-209ENST00000555353 IGKV6D-41A0A0C4DH26 115 aa24.25■■□□□ 1.47
FOXN3-209ENST00000555353 USP17L15C9J2P7 530 aa24.25■■□□□ 1.47
FOXN3-209ENST00000555353 USP17L13C9JLJ4 530 aa24.25■■□□□ 1.47
FOXN3-209ENST00000555353 USP17L11C9JVI0 530 aa24.25■■□□□ 1.47
FOXN3-209ENST00000555353 USP17L18D6R9N7 530 aa24.25■■□□□ 1.47
FOXN3-209ENST00000555353 USP17L22D6RA61 530 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms