RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CST9Q5W186 159 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
TDP1-211ENST00000555178 SLKQ9H2G2 1235 aaPredicted RBP12.66□□□□□ -0.38
TDP1-211ENST00000555178 PTPRFP10586 1907 aa12.66□□□□□ -0.38
TDP1-211ENST00000555178 A0A1W2PRG0 241 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 PPFIA3O75145 1194 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 CAP2P40123 477 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 ABCB5Q2M3G0 1257 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
TDP1-211ENST00000555178 ACER1Q8TDN7 264 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 KLRG1Q96E93 195 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 WRNIP1Q96S55 665 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
TDP1-211ENST00000555178 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
TDP1-211ENST00000555178 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 NAP1L2Q9ULW6 460 aaPredicted RBP12.65□□□□□ -0.38
TDP1-211ENST00000555178 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 PCNTO95613 3336 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 UBE2Q2LH0YL09 131 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 ECE1P42892 770 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 RAB3GAP1Q15042 981 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 KIAA1755Q5JYT7 1200 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 CHADLQ6NUI6 762 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 ZBTB21Q9ULJ3 1066 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
TDP1-211ENST00000555178 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
TDP1-211ENST00000555178 KLF18A0A0U1RQI7 1052 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 MCM2P49736 904 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 CCDC144CPQ8IYA2 1237 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
TDP1-211ENST00000555178 NCOA5Q9HCD5 579 aaKnown RBP12.64□□□□□ -0.39
TDP1-211ENST00000555178 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 WDR19Q8NEZ3 1342 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 PLIN4Q96Q06 1357 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 PCP11498 1178 aaKnown RBP12.64□□□□□ -0.39
TDP1-211ENST00000555178 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
TDP1-211ENST00000555178 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
TDP1-211ENST00000555178 LRRC47Q8N1G4 583 aaKnown RBP12.64□□□□□ -0.39
TDP1-211ENST00000555178 TMEM47Q9BQJ4 181 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 UBAC1Q9BSL1 405 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
TDP1-211ENST00000555178 NOVP48745 357 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 ATP2B2Q01814 1243 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 VGLL4Q14135 290 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 ANKRD1Q15327 319 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 SUPT20HL1Q3ZLR7 823 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 SNCAIPQ9Y6H5 919 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
TDP1-211ENST00000555178 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 CELF2O95319 508 aaKnown RBP12.62□□□□□ -0.39
TDP1-211ENST00000555178 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
TDP1-211ENST00000555178 PDIA3P30101 505 aaKnown RBP12.62□□□□□ -0.39
TDP1-211ENST00000555178 SCRN1Q12765 414 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 CUL4AQ13619 759 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 WTAPQ15007 396 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 TTLL12Q14166 644 aaPredicted RBP12.62□□□□□ -0.39
TDP1-211ENST00000555178 NFXL1Q6ZNB6 911 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
TDP1-211ENST00000555178 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 FAM217BQ9NTX9 383 aaPredicted RBP12.62□□□□□ -0.39
TDP1-211ENST00000555178 MYH6P13533 1939 aa12.62□□□□□ -0.39
TDP1-211ENST00000555178 CDC27P30260 824 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
TDP1-211ENST00000555178 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
TDP1-211ENST00000555178 DCAF15Q66K64 600 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 APOA5Q6Q788 366 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 IQCA1Q86XH1 822 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 PASKQ96RG2 1323 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 CTNND1O60716 968 aaKnown RBP12.61□□□□□ -0.39
TDP1-211ENST00000555178 PTPRAP18433 802 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 LIFRP42702 1097 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 EVCP57679 992 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 ICA1Q05084 483 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
TDP1-211ENST00000555178 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 TMEM179Q6ZVK1 233 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
TDP1-211ENST00000555178 SH2B1Q9NRF2 756 aaPredicted RBP12.61□□□□□ -0.39
TDP1-211ENST00000555178 ERICH2A1L162 156 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 JAK2O60674 1132 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 GJA5P36382 358 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 TROAPQ12815 778 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 SCYL3Q8IZE3 742 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 ZNF654Q8IZM8 581 aa12.6□□□□□ -0.39
TDP1-211ENST00000555178 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms