RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 SMAD7O15105 426 aaKnown RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 KCNQ2O43526 872 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 TRIM37O94972 964 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 ASMTLO95671 621 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 MYL1P05976 194 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 RAB27AP51159 221 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 CCDC184Q52MB2 194 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 TPTE2Q6XPS3 522 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 TMEM102Q8N9M5 508 aaPredicted RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 FAM46AQ96IP4 442 aaKnown RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 EAF1Q96JC9 268 aaPredicted RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 DBNDD2Q9BQY9 259 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 LACRTQ9GZZ8 138 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 ZIM2Q9NZV7 527 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 WDR64B1ANS9 1081 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 TM4SF5O14894 197 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 PRPF3O43395 683 aaKnown RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 FBXO24O75426 580 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 KATNA1O75449 491 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 CD68P34810 354 aaPredicted RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 EPHB1P54762 984 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 MAP3K11Q16584 847 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 ZNF280DQ6N043 979 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 KIAA1211Q6ZU35 1233 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 KRT26Q7Z3Y9 468 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 THNSL2Q86YJ6 484 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 MYO1HQ8N1T3 1032 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 ASAP3Q8TDY4 903 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 SMAD5Q99717 465 aaKnown RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 INO80BQ9C086 356 aaPredicted RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 BHLHE41Q9C0J9 482 aaPredicted RBP4.89□□□□□ -1.63
KTN1-220ENST00000555172 PRKAG3Q9UGI9 489 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 PFDN2Q9UHV9 154 aa4.89□□□□□ -1.63
KTN1-220ENST00000555172 A0A096LPE4 126 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 A0A1W2PPZ6 126 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 PDE2AO00408 941 aaPredicted RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 IRS4O14654 1257 aaPredicted RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 DIAPH1O60610 1272 aaKnown RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 FAM163BP0C2L3 166 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 ACPPP15309 386 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 LMNB1P20700 586 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 ITPKAP23677 461 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 EIF4A3P38919 411 aaKnown RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 GRIA4P48058 902 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 SOX9P48436 509 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 POU5F1BQ06416 359 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 VPS72Q15906 364 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 C2orf27AQ580R0 203 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 RPS26P11Q5JNZ5 115 aaPredicted RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 CPLX3Q8WVH0 158 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 NXPE3Q969Y0 559 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 MYRFLQ96LU7 910 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 PBX4Q9BYU1 374 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 KCNF1Q9H3M0 494 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 MAPK8IP1Q9UQF2 711 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 R3HCC1Q9Y3T6 440 aaKnown RBP4.88□□□□□ -1.63
KTN1-220ENST00000555172 PTCH2Q9Y6C5 1203 aa4.88□□□□□ -1.63
KTN1-220ENST00000555172 NPHP1O15259 732 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 EPB41L2O43491 1005 aaKnown RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 TRPA1O75762 1119 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 SMNDC1O75940 238 aaKnown RBP eCLIP4.87□□□□□ -1.63
KTN1-220ENST00000555172 MCCP23508 829 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 ATP11AP98196 1134 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 DDR2Q16832 855 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 DIEXFQ68CQ4 756 aaKnown RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 SHISA5Q8N114 240 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 TTC8Q8TAM2 541 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 UBASH3BQ8TF42 649 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 PAGR1Q9BTK6 254 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 RASSF4Q9H2L5 321 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 TAGLN3Q9UI15 199 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 NOB1Q9ULX3 412 aaKnown RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 PPT2Q9UMR5 302 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 LZTS1Q9Y250 596 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 WASHC2CQ9Y4E1 1318 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 FAM177BA6PVY3 158 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 PDPK1O15530 556 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 MYCLP1P12525 358 aaPredicted RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 BMP3P12645 472 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 STAT3P40763 770 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 LIG3P49916 1009 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 PPP2R3AQ06190 1150 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 SPRED3Q2MJR0 410 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 SPATC1Q76KD6 591 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 LRP10Q7Z4F1 713 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 PCGF5Q86SE9 256 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 PAF1Q8N7H5 531 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 ZNF296Q8WUU4 475 aaPredicted RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 MFSD14AQ96MC6 490 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 CEP41Q9BYV8 373 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 CASS4Q9NQ75 786 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 UBP1Q9NZI7 540 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 GPN3Q9UHW5 284 aaPredicted RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 MRPS23Q9Y3D9 190 aaKnown RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 SAMM50Q9Y512 469 aa4.87□□□□□ -1.63
KTN1-220ENST00000555172 SUPT16HQ9Y5B9 1047 aaKnown RBP4.87□□□□□ -1.63
KTN1-220ENST00000555172 METTL12A8MUP2 240 aa4.86□□□□□ -1.63
KTN1-220ENST00000555172 NFKBIEO00221 500 aa4.86□□□□□ -1.63
KTN1-220ENST00000555172 AKAP10O43572 662 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms