RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 AGMOQ6ZNB7 445 aa9.21□□□□□ -0.94
VRK1-203ENST00000555067 HID1Q8IV36 788 aa9.21□□□□□ -0.94
VRK1-203ENST00000555067 SLC26A8Q96RN1 970 aa9.21□□□□□ -0.94
VRK1-203ENST00000555067 MIPEPQ99797 713 aa9.21□□□□□ -0.94
VRK1-203ENST00000555067 RLBP1P12271 317 aa9.2□□□□□ -0.94
VRK1-203ENST00000555067 LIG3P49916 1009 aa9.2□□□□□ -0.94
VRK1-203ENST00000555067 LINC00310P59036 64 aa9.2□□□□□ -0.94
VRK1-203ENST00000555067 TTC6Q86TZ1 520 aa9.2□□□□□ -0.94
VRK1-203ENST00000555067 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
VRK1-203ENST00000555067 SEPT6Q14141 434 aa9.19□□□□□ -0.94
VRK1-203ENST00000555067 NKG7Q16617 165 aa9.19□□□□□ -0.94
VRK1-203ENST00000555067 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
VRK1-203ENST00000555067 MIR1-1HGQ9H1L0 117 aa9.19□□□□□ -0.94
VRK1-203ENST00000555067 SLAMF8Q9P0V8 285 aa9.19□□□□□ -0.94
VRK1-203ENST00000555067 JAG2Q9Y219 1238 aa9.19□□□□□ -0.94
VRK1-203ENST00000555067 HPXP02790 462 aa9.18□□□□□ -0.94
VRK1-203ENST00000555067 RAC2P15153 192 aa9.18□□□□□ -0.94
VRK1-203ENST00000555067 GRK4P32298 578 aa9.18□□□□□ -0.94
VRK1-203ENST00000555067 COX4I2Q96KJ9 171 aa9.18□□□□□ -0.94
VRK1-203ENST00000555067 PARP2Q9UGN5 583 aa9.18□□□□□ -0.94
VRK1-203ENST00000555067 PCDHB5Q9Y5E4 795 aa9.18□□□□□ -0.94
VRK1-203ENST00000555067 DNAJC25-GNG10A0A024R161 153 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 GFRA2O00451 464 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 NUAK1O60285 661 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
VRK1-203ENST00000555067 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
VRK1-203ENST00000555067 CDK8P49336 464 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 ST13P50502 369 aaKnown RBP9.17□□□□□ -0.94
VRK1-203ENST00000555067 ERVFC1P60507 584 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 PSMD2Q13200 908 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 RALGPS1Q5JS13 557 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 LETMD1Q6P1Q0 360 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 RIN3Q8TB24 985 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 KCNN1Q92952 543 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 UBE2FQ969M7 185 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 NOC4LQ9BVI4 516 aaKnown RBP9.17□□□□□ -0.94
VRK1-203ENST00000555067 RNF19AQ9NV58 838 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 TMEM59LQ9UK28 342 aa9.17□□□□□ -0.94
VRK1-203ENST00000555067 ESR1P03372 595 aa9.16□□□□□ -0.94
VRK1-203ENST00000555067 DAB2P98082 770 aa9.16□□□□□ -0.94
VRK1-203ENST00000555067 TRIM26Q12899 539 aaPredicted RBP9.16□□□□□ -0.94
VRK1-203ENST00000555067 MAP3K11Q16584 847 aa9.16□□□□□ -0.94
VRK1-203ENST00000555067 MEI1Q5TIA1 1274 aa9.16□□□□□ -0.94
VRK1-203ENST00000555067 PRAMEF13Q5VWM6 474 aa9.16□□□□□ -0.94
VRK1-203ENST00000555067 DIEXFQ68CQ4 756 aaKnown RBP9.16□□□□□ -0.94
VRK1-203ENST00000555067 MYLIPQ8WY64 445 aa9.16□□□□□ -0.94
VRK1-203ENST00000555067 CYP7A1P22680 504 aa9.15□□□□□ -0.94
VRK1-203ENST00000555067 PDE4BQ07343 736 aa9.15□□□□□ -0.94
VRK1-203ENST00000555067 TSNAXIP1Q2TAA8 658 aa9.15□□□□□ -0.94
VRK1-203ENST00000555067 MRPL41Q8IXM3 137 aaKnown RBP9.15□□□□□ -0.94
VRK1-203ENST00000555067 SP110Q9HB58 689 aa9.15□□□□□ -0.94
VRK1-203ENST00000555067 ZSWIM5Q9P217 1185 aa9.15□□□□□ -0.94
VRK1-203ENST00000555067 RBAK-RBAKDNI3L0D1 243 aa9.14□□□□□ -0.95
VRK1-203ENST00000555067 TFE3P19532 575 aaPredicted RBP9.14□□□□□ -0.95
VRK1-203ENST00000555067 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
VRK1-203ENST00000555067 TNK2Q07912 1038 aa9.14□□□□□ -0.95
VRK1-203ENST00000555067 TAF1CQ15572 869 aaPredicted RBP9.14□□□□□ -0.95
VRK1-203ENST00000555067 DNAJC14Q6Y2X3 702 aaPredicted RBP9.14□□□□□ -0.95
VRK1-203ENST00000555067 TMPRSS7Q7RTY8 843 aa9.14□□□□□ -0.95
VRK1-203ENST00000555067 RELTQ969Z4 430 aa9.14□□□□□ -0.95
VRK1-203ENST00000555067 PARD6AQ9NPB6 346 aa9.14□□□□□ -0.95
VRK1-203ENST00000555067 PGRP06401 933 aa9.13□□□□□ -0.95
VRK1-203ENST00000555067 KIR3DL1P43629 444 aa9.13□□□□□ -0.95
VRK1-203ENST00000555067 RPL6Q02878 288 aaKnown RBP9.13□□□□□ -0.95
VRK1-203ENST00000555067 SLC6A19Q695T7 634 aa9.13□□□□□ -0.95
VRK1-203ENST00000555067 TMC4Q7Z404 712 aa9.13□□□□□ -0.95
VRK1-203ENST00000555067 CBX7O95931 251 aa9.12□□□□□ -0.95
VRK1-203ENST00000555067 IRF2BPLQ9H1B7 796 aa9.12□□□□□ -0.95
VRK1-203ENST00000555067 ADAM30Q9UKF2 790 aa9.12□□□□□ -0.95
VRK1-203ENST00000555067 ADAMTS20P59510 1910 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 ITGAEP38570 1179 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 CCDC84Q86UT8 332 aaPredicted RBP9.11□□□□□ -0.95
VRK1-203ENST00000555067 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 CRELD1Q96HD1 420 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 TMEM87BQ96K49 555 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 ADAMTS10Q9H324 1103 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 TJP2Q9UDY2 1190 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
VRK1-203ENST00000555067 ETV3P41162 512 aa9.1□□□□□ -0.95
VRK1-203ENST00000555067 HK2P52789 917 aa9.1□□□□□ -0.95
VRK1-203ENST00000555067 FBXO33Q7Z6M2 555 aa9.1□□□□□ -0.95
VRK1-203ENST00000555067 PHC3Q8NDX5 983 aa9.1□□□□□ -0.95
VRK1-203ENST00000555067 PIWIL2Q8TC59 973 aaKnown RBP9.1□□□□□ -0.95
VRK1-203ENST00000555067 RNF32Q9H0A6 362 aa9.1□□□□□ -0.95
VRK1-203ENST00000555067 A0A0G2JLL6 359 aaPredicted RBP9.09□□□□□ -0.95
VRK1-203ENST00000555067 CTSHP09668 335 aa9.09□□□□□ -0.95
VRK1-203ENST00000555067 MCATQ8IVS2 390 aaKnown RBP9.09□□□□□ -0.95
VRK1-203ENST00000555067 BAHD1Q8TBE0 780 aaPredicted RBP9.09□□□□□ -0.95
VRK1-203ENST00000555067 MCOLN1Q9GZU1 580 aa9.09□□□□□ -0.95
VRK1-203ENST00000555067 TLR6Q9Y2C9 796 aa9.09□□□□□ -0.95
VRK1-203ENST00000555067 ERCC3P19447 782 aa9.08□□□□□ -0.96
VRK1-203ENST00000555067 CDH24Q86UP0 819 aa9.08□□□□□ -0.96
VRK1-203ENST00000555067 IRF2BP1Q8IU81 584 aa9.08□□□□□ -0.96
VRK1-203ENST00000555067 JARID2Q92833 1246 aaPredicted RBP9.08□□□□□ -0.96
VRK1-203ENST00000555067 DPH2Q9BQC3 489 aaPredicted RBP9.08□□□□□ -0.96
VRK1-203ENST00000555067 MYOCOSA0A1B0GUC4 107 aa9.07□□□□□ -0.96
VRK1-203ENST00000555067 SORBS3O60504 671 aa9.07□□□□□ -0.96
VRK1-203ENST00000555067 BPNT1O95861 308 aa9.07□□□□□ -0.96
VRK1-203ENST00000555067 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
VRK1-203ENST00000555067 DLG4P78352 724 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms