RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 SEC31BQ9NQW1 1179 aa4.23□□□□□ -1.73
SEC23A-208ENST00000555017 POLKQ9UBT6 870 aa4.23□□□□□ -1.73
SEC23A-208ENST00000555017 COL16A1Q07092 1604 aaPredicted RBP4.23□□□□□ -1.73
SEC23A-208ENST00000555017 COL3A1P02461 1466 aaPredicted RBP4.23□□□□□ -1.73
SEC23A-208ENST00000555017 CGNL1Q0VF96 1302 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 MAP3K19Q56UN5 1328 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 COL18A1P39060 1754 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 OVOS2A0A0J9YW53 1432 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 OVOS2Q6IE36 1432 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 TMEM238LA0A1B0GVL6 79 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 HMOX1P09601 288 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 HSPA1LP34931 641 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 FCGRTP55899 365 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 GSTM4Q03013 218 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 PCDH1Q08174 1060 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 IKBKEQ14164 716 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 ACAD11Q709F0 780 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.22□□□□□ -1.73
SEC23A-208ENST00000555017 TXNRD3Q86VQ6 643 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 USHBP1Q8N6Y0 703 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 PNISRQ8TF01 805 aaKnown RBP4.22□□□□□ -1.73
SEC23A-208ENST00000555017 LRRC59Q96AG4 307 aaKnown RBP4.22□□□□□ -1.73
SEC23A-208ENST00000555017 BCO2Q9BYV7 579 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 DNAJC25Q9H1X3 360 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 RRP7AQ9Y3A4 280 aaKnown RBP4.22□□□□□ -1.73
SEC23A-208ENST00000555017 USP54Q70EL1 1684 aa4.22□□□□□ -1.73
SEC23A-208ENST00000555017 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.73
SEC23A-208ENST00000555017 MYBBP1AQ9BQG0 1328 aaKnown RBP4.21□□□□□ -1.73
SEC23A-208ENST00000555017 DCCP43146 1447 aa4.21□□□□□ -1.73
SEC23A-208ENST00000555017 NFAT5O94916 1531 aa4.21□□□□□ -1.73
SEC23A-208ENST00000555017 DLG5Q8TDM6 1919 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 COBLO75128 1261 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 RALBP1Q15311 655 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 DUOXA2Q1HG44 320 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 NKAPLQ5M9Q1 402 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 STK35Q8TDR2 534 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 TP53INP1Q96A56 240 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 COG3Q96JB2 828 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 TRIM56Q9BRZ2 755 aaKnown RBP4.21□□□□□ -1.74
SEC23A-208ENST00000555017 ZNF576Q9H609 170 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 SLIT3O75094 1523 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 TNS3Q68CZ2 1445 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 NCOA3Q9Y6Q9 1424 aa4.21□□□□□ -1.74
SEC23A-208ENST00000555017 USP31Q70CQ4 1352 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 NPC1L1Q9UHC9 1359 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 NINLQ9Y2I6 1382 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 CCER2I3L3R5 266 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 U2SURPO15042 1029 aaKnown RBP4.2□□□□□ -1.74
SEC23A-208ENST00000555017 GCP02774 474 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 NEFLP07196 543 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 ITPKAP23677 461 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 CABP4P57796 275 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 C19orf57Q0VDD7 668 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 EIF4A2Q14240 407 aaKnown RBP4.2□□□□□ -1.74
SEC23A-208ENST00000555017 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 MPRIPQ6WCQ1 1025 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 CACTIN-AS1Q8N1I8 211 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 TMEM130Q8N3G9 435 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 PHACTR3Q96KR7 559 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 FAM161BQ96MY7 647 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 NACC1Q96RE7 527 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 USP26Q9BXU7 913 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 ZC3H12CQ9C0D7 883 aaKnown RBP4.2□□□□□ -1.74
SEC23A-208ENST00000555017 NRSN2Q9GZP1 204 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 MRPL18Q9H0U6 180 aaKnown RBP4.2□□□□□ -1.74
SEC23A-208ENST00000555017 CLEC4MQ9H2X3 399 aaPredicted RBP4.2□□□□□ -1.74
SEC23A-208ENST00000555017 SEMA6BQ9H3T3 888 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 AKTIPQ9H8T0 292 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 OSGEPQ9NPF4 335 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 RGPD1P0DJD0 1748 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 LRP6O75581 1613 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 AHDC1Q5TGY3 1603 aaPredicted RBP4.2□□□□□ -1.74
SEC23A-208ENST00000555017 NPHP3Q7Z494 1330 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 TTC21AQ8NDW8 1320 aa4.2□□□□□ -1.74
SEC23A-208ENST00000555017 PLCH1Q4KWH8 1693 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 CAMTA1Q9Y6Y1 1673 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 VIRMAQ69YN4 1812 aaKnown RBP4.19□□□□□ -1.74
SEC23A-208ENST00000555017 PNPLA6Q8IY17 1366 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 KIAA0232Q92628 1395 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 LOC100289279A0A1B0GTE1 492 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 FAM83GA6ND36 823 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 FBXO24O75426 580 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 LDHBP07195 334 aaKnown RBP4.19□□□□□ -1.74
SEC23A-208ENST00000555017 DRD2P14416 443 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 GLB1P16278 677 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 HOXC9P31274 260 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 IL13P35225 146 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 AMPHP49418 695 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 NBPF6Q5VWK0 638 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 PRPF40BQ6NWY9 871 aaKnown RBP4.19□□□□□ -1.74
SEC23A-208ENST00000555017 FAM117BQ6P1L5 589 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 NPAS4Q8IUM7 802 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 ZSCAN29Q8IWY8 852 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-208ENST00000555017 ARMC10Q8N2F6 343 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 KLHL23Q8NBE8 558 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 C3orf58Q8NDZ4 430 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 WDR89Q96FK6 387 aaPredicted RBP4.19□□□□□ -1.74
SEC23A-208ENST00000555017 NBPF4Q96M43 638 aa4.19□□□□□ -1.74
SEC23A-208ENST00000555017 THUMPD2Q9BTF0 503 aaKnown RBP4.19□□□□□ -1.74
SEC23A-208ENST00000555017 NLRP2Q9NX02 1062 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms