RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZNF277Q9NRM2 450 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 LMCD1Q9NZU5 365 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 ZRANB1Q9UGI0 708 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 SYNDIG1LA6NDD5 238 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 EXOC3O60645 756 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 DDB1Q16531 1140 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 IPO11Q9UI26 975 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 PA2G4Q9UQ80 394 aaKnown RBP7.6□□□□□ -1.19
SYNE2-216ENST00000555002 TTC21BQ7Z4L5 1316 aa7.6□□□□□ -1.19
SYNE2-216ENST00000555002 GUCY2FP51841 1108 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 ARPP19P56211 112 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 NUCB1Q02818 461 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 KRBA2Q6ZNG9 492 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 COPS6Q7L5N1 327 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 ZNF467Q7Z7K2 595 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-216ENST00000555002 IFT20Q8IY31 132 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 VPS16Q9H269 839 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 DACT1Q9NYF0 836 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 KDRP35968 1356 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 PFDN6O15212 129 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 RARSP54136 660 aaKnown RBP7.59□□□□□ -1.19
SYNE2-216ENST00000555002 CALCRLQ16602 461 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 ARHGEF16Q5VV41 709 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 NELFCDQ8IXH7 590 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 MBIPQ9NS73 344 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 TEKT2Q9UIF3 430 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 HAUS3Q68CZ6 603 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 RNF10Q8N5U6 811 aaKnown RBP7.59□□□□□ -1.19
SYNE2-216ENST00000555002 PRIMPOLQ96LW4 560 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 HACD3Q9P035 362 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 ADCY7P51828 1080 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 DEPTORQ8TB45 409 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 FAM71BQ8TC56 605 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 DMRT2Q9Y5R5 561 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 HFM1A2PYH4 1435 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 RNF8O76064 485 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 PEX26Q7Z412 305 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 WDR48Q8TAF3 677 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 RBM46Q8TBY0 533 aaKnown RBP7.59□□□□□ -1.19
SYNE2-216ENST00000555002 KRT82Q9NSB4 513 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 PNMA2Q9UL42 364 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 ELP1O95163 1332 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 KIAA1107Q9UPP5 1409 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 NOLC1Q14978 699 aaKnown RBP eCLIP7.59□□□□□ -1.19
SYNE2-216ENST00000555002 ATP6V1E2Q96A05 226 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 HOOK2Q96ED9 719 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 NDUFAB1O14561 156 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 CEBPAP49715 358 aaPredicted RBP7.59□□□□□ -1.19
SYNE2-216ENST00000555002 CCDC24Q8N4L8 307 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 NPR1P16066 1061 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 TXKP42681 527 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 SFMBT2Q5VUG0 894 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 SMARCA4P51532 1647 aa7.59□□□□□ -1.19
SYNE2-216ENST00000555002 TRIM27P14373 513 aa7.59□□□□□ -1.2
SYNE2-216ENST00000555002 ADAT2Q7Z6V5 191 aaKnown RBP7.59□□□□□ -1.2
SYNE2-216ENST00000555002 ZNF513Q8N8E2 541 aaPredicted RBP7.59□□□□□ -1.2
SYNE2-216ENST00000555002 TMX3Q96JJ7 454 aa7.59□□□□□ -1.2
SYNE2-216ENST00000555002 RAB20Q9NX57 234 aa7.59□□□□□ -1.2
SYNE2-216ENST00000555002 PPFIA4O75335 1185 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 OCM2P0CE71 109 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 OCMP0CE72 109 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 SLC1A4P43007 532 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 TFCP2Q12800 502 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 PUM3Q15397 648 aaKnown RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 ANAPC5Q9UJX4 755 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 INPP5BP32019 993 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 TRIM35Q9UPQ4 493 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 HMGB1P1B2RPK0 211 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RAP1GDS1P52306 607 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RAB44Q7Z6P3 723 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 APOEP02649 317 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 LMBR1LQ6UX01 489 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 HELLSQ9NRZ9 838 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 TOM1O60784 492 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 ZNF449Q6P9G9 518 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 NR1H4Q96RI1 486 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 SYNDIG1Q9H7V2 258 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 FAF1Q9UNN5 650 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 PDCD2Q16342 344 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RHPN1Q8TCX5 695 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 U2AF1L4Q8WU68 220 aaKnown RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 LRRC9Q6ZRR7 1453 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 CFBP00751 764 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 TRAPPC10P48553 1259 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RNASELQ05823 741 aaKnown RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RSBN1LQ6PCB5 846 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RSRC2Q7L4I2 434 aaKnown RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 N4BP2L2Q92802 583 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 FIS1Q9Y3D6 152 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 RUSC2Q8N2Y8 1516 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 EHBP1L1Q8N3D4 1523 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 IL15P40933 162 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 SUGCTQ9HAC7 445 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 SYF2O95926 243 aaKnown RBP7.58□□□□□ -1.2
SYNE2-216ENST00000555002 PLCD1P51178 756 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 CYP26C1Q6V0L0 522 aa7.58□□□□□ -1.2
SYNE2-216ENST00000555002 TTC6Q86TZ1 520 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms