RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 CFAP45Q9UL16 551 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 MORC2Q9Y6X9 1032 aaPredicted RBP10.34□□□□□ -0.75
TDP1-210ENST00000554976 CCDC196A0A1B0GTZ2 297 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 SYCE3A1L190 88 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 SCNN1DP51172 638 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 TGFB2P61812 414 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 PDE4CQ08493 712 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 SNW1Q13573 536 aaKnown RBP10.34□□□□□ -0.75
TDP1-210ENST00000554976 SLC4A8Q2Y0W8 1093 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
TDP1-210ENST00000554976 SH3BP5LQ7L8J4 393 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 ENGASEQ8NFI3 743 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 RBSNQ9H1K0 784 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 FAM198AQ9UFP1 575 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 CLIC4Q9Y696 253 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 SBF1O95248 1867 aa10.34□□□□□ -0.75
TDP1-210ENST00000554976 CCDC93Q567U6 631 aa10.33□□□□□ -0.75
TDP1-210ENST00000554976 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.75
TDP1-210ENST00000554976 TEKT1Q969V4 418 aa10.33□□□□□ -0.75
TDP1-210ENST00000554976 PAPPA2Q9BXP8 1791 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 TSPY2A6NKD2 308 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 SHMT1P34896 483 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 TOB1P50616 345 aaPredicted RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 NFIAQ12857 509 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 ZFPM1Q8IX07 1006 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 ZNF396Q96N95 335 aaPredicted RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 PALM3A6NDB9 673 aaPredicted RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 F8W031 263 aaPredicted RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 YEATS4O95619 227 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 VIL1P09327 827 aaKnown RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 RTKN2Q8IZC4 609 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 WASF1Q92558 559 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 PANK2Q9BZ23 570 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 FOXP1Q9H334 677 aaPredicted RBP10.33□□□□□ -0.76
TDP1-210ENST00000554976 USP40Q9NVE5 1235 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
TDP1-210ENST00000554976 FAM237AA0A1B0GTK4 181 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 SNHG28P0DPA3 235 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 RBM10P98175 930 aaKnown RBP10.32□□□□□ -0.76
TDP1-210ENST00000554976 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
TDP1-210ENST00000554976 CPLX2Q6PUV4 134 aaKnown RBP10.32□□□□□ -0.76
TDP1-210ENST00000554976 MTFR1LQ9H019 292 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 M0R2N6 131 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 ADAMTS3O15072 1205 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 POLR3DP05423 398 aaPredicted RBP10.32□□□□□ -0.76
TDP1-210ENST00000554976 PTGER2P43116 358 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 NUP133Q8WUM0 1156 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 ZBED3Q96IU2 234 aaPredicted RBP10.32□□□□□ -0.76
TDP1-210ENST00000554976 TMX4Q9H1E5 349 aaPredicted RBP10.32□□□□□ -0.76
TDP1-210ENST00000554976 PCDHA7Q9UN72 937 aa10.32□□□□□ -0.76
TDP1-210ENST00000554976 A0A1W2PQ27 194 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 A0A1W2PQ64 194 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 A0A1W2PQD8 194 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 CYTH3O43739 400 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 NR1I2O75469 434 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 PNMA1Q8ND90 353 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 SYAP1Q96A49 352 aaPredicted RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 ZNF219Q9P2Y4 722 aaPredicted RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 SWAP70Q9UH65 585 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 PARP14Q460N5 1801 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 CNTNAP1P78357 1384 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 TSPY3P0CV98 308 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 TSPY8P0CW00 308 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 VEGFAP15692 232 aaPredicted RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 PFKFB3Q16875 520 aaPredicted RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 RASGRP2Q7LDG7 609 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 NOSTRINQ8IVI9 506 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 OXER1Q8TDS5 423 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 CLSTN2Q9H4D0 955 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 KCNJ14Q9UNX9 436 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 LETM1O95202 739 aaPredicted RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 SLC39A14Q15043 492 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 EARS2Q5JPH6 523 aaKnown RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 ANO1Q5XXA6 986 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 TATDN1Q6P1N9 297 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 KIAA0825Q8IV33 1275 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 AMOTL1Q8IY63 956 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.31□□□□□ -0.76
TDP1-210ENST00000554976 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
TDP1-210ENST00000554976 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
TDP1-210ENST00000554976 PPIP5K2O43314 1243 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 PPP6R2O75170 966 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 AKR1B1P15121 316 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 ADALQ6DHV7 355 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 MTMR14Q8NCE2 650 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 FBXW7Q969H0 707 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 MKNK2Q9HBH9 465 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 ZNF287Q9HBT7 754 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 LTBP3Q9NS15 1303 aa10.3□□□□□ -0.76
TDP1-210ENST00000554976 BTBD18B2RXH4 712 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms