RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CHMP4BP1P59074 171 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 STK11IPQ8N1F8 1099 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 FAM181AQ8N9Y4 354 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 FERD3LQ96RJ6 166 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 ACBD3Q9H3P7 528 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 ANGEL1Q9UNK9 670 aaKnown RBP6.57□□□□□ -1.36
SCFD1-214ENST00000554819 SNX11Q9Y5W9 270 aa6.57□□□□□ -1.36
SCFD1-214ENST00000554819 WNT11O96014 354 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 PRNPP04156 253 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
SCFD1-214ENST00000554819 ARSHQ5FYA8 562 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 CDCP2Q5VXM1 449 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 NBPF11Q86T75 865 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 VPS37DQ86XT2 251 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 PLD6Q8N2A8 252 aaKnown RBP6.56□□□□□ -1.36
SCFD1-214ENST00000554819 Q8N3U1 123 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 DNAJB8Q8NHS0 232 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 TMEM40Q8WWA1 233 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 ZNRF3Q9ULT6 936 aa6.56□□□□□ -1.36
SCFD1-214ENST00000554819 MEIS3P2A8K0S8 358 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 FAM155AB1AL88 458 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-214ENST00000554819 RGS13O14921 159 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 DNAJA2O60884 412 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 CBX7O95931 251 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 ZNF865P0CJ78 1059 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-214ENST00000554819 ITIH2P19823 946 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 CCNFP41002 786 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 PRKCQQ04759 706 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 OVOS1Q6IE37 1185 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 NLRC3Q7RTR2 1065 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 VSIG10LQ86VR7 867 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 MFSD4AQ8N468 514 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 BAHD1Q8TBE0 780 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-214ENST00000554819 PPP1R13LQ8WUF5 828 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 ATG4CQ96DT6 458 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 KIF2CQ99661 725 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 TNKS2Q9H2K2 1166 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 CCDC39Q9UFE4 941 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 VAV3Q9UKW4 847 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 SLC5A6Q9Y289 635 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
SCFD1-214ENST00000554819 SOX9P48436 509 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 CLCN7P51798 805 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 FBXW10Q5XX13 1052 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 SEC16BQ96JE7 1060 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 HRASLS5Q96KN8 279 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 FBXL18Q96ME1 805 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 CRBNQ96SW2 442 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCFD1-214ENST00000554819 IGSF5Q9NSI5 407 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 GINM1Q9NU53 330 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 PLAGL2Q9UPG8 496 aa6.54□□□□□ -1.36
SCFD1-214ENST00000554819 CNTNAP4Q9C0A0 1308 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 NME1P15531 152 aaKnown RBP6.53□□□□□ -1.36
SCFD1-214ENST00000554819 INTS3Q68E01 1043 aaKnown RBP6.53□□□□□ -1.36
SCFD1-214ENST00000554819 SPACA3Q8IXA5 215 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 RBBP8NLQ8NC74 664 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-214ENST00000554819 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
SCFD1-214ENST00000554819 RNF141Q8WVD5 230 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 ASB11Q8WXH4 323 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 CAPN10Q9HC96 672 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 KCNH3Q9ULD8 1083 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 CAPN6Q9Y6Q1 641 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 U3KQE9 123 aa6.53□□□□□ -1.36
SCFD1-214ENST00000554819 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 AOC3Q16853 763 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 NKPD1Q17RQ9 610 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 BCL7CQ8WUZ0 217 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-214ENST00000554819 KREMEN1Q96MU8 473 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 TM9SF2Q99805 663 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 ASPNQ9BXN1 380 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 ANTXR1Q9H6X2 564 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 STRIP2Q9ULQ0 834 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 PPT2Q9UMR5 302 aa6.52□□□□□ -1.37
SCFD1-214ENST00000554819 PRR33A8MZF0 331 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 NASPP49321 788 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-214ENST00000554819 EIF6P56537 245 aaKnown RBP6.51□□□□□ -1.37
SCFD1-214ENST00000554819 RNF4P78317 190 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 CDKAL1Q5VV42 579 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 TAB3Q8N5C8 712 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-214ENST00000554819 AGBL5Q8NDL9 886 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 FLCNQ8NFG4 579 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 OR6P1Q8NGX9 317 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
SCFD1-214ENST00000554819 UBOX5O94941 541 aa6.5□□□□□ -1.37
SCFD1-214ENST00000554819 GP2P55259 537 aaKnown RBP6.5□□□□□ -1.37
SCFD1-214ENST00000554819 TNK2Q07912 1038 aa6.5□□□□□ -1.37
SCFD1-214ENST00000554819 THAP5Q7Z6K1 395 aa6.5□□□□□ -1.37
SCFD1-214ENST00000554819 TP53INP2Q8IXH6 220 aa6.5□□□□□ -1.37
SCFD1-214ENST00000554819 DHRS1Q96LJ7 313 aa6.5□□□□□ -1.37
SCFD1-214ENST00000554819 HSPA12BQ96MM6 686 aa6.5□□□□□ -1.37
SCFD1-214ENST00000554819 SRRTQ9BXP5 876 aaKnown RBP6.5□□□□□ -1.37
SCFD1-214ENST00000554819 TRIT1Q9H3H1 467 aaKnown RBP6.5□□□□□ -1.37
SCFD1-214ENST00000554819 CLEC3AO75596 197 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 ATF4P18848 351 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-214ENST00000554819 GIPRP48546 466 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 BNIP3Q12983 259 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms