RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 DCP1AQ9NPI6 582 aaPredicted RBP12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 MCM9Q9NXL9 1143 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 TMOD4Q9NZQ9 345 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 SRRDQ9UH36 339 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
PTCD2P1-201ENST00000554393 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 GH2P01242 217 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 OSBPP22059 807 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 CTGFP29279 349 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 HOXA7P31268 230 aaPredicted RBP12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 SHMT1P34896 483 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 FAM110CQ1W6H9 321 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 ZNF333Q96JL9 665 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 ARMT1Q9H993 441 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 SWAP70Q9UH65 585 aa12.54□□□□□ -0.4
PTCD2P1-201ENST00000554393 ERC2O15083 957 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 FMNL1O95466 1100 aaPredicted RBP12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 ABCB5Q2M3G0 1257 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 SHROOM1Q2M3G4 852 aaPredicted RBP12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 LRRFIP1Q32MZ4 808 aaKnown RBP12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 C12orf42Q96LP6 360 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 CABP5Q9NP86 173 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 COL6A3P12111 3177 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 MYPNQ86TC9 1320 aa12.53□□□□□ -0.4
PTCD2P1-201ENST00000554393 GLRX3O76003 335 aaKnown RBP12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP14P54578 494 aa12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 IRX3P78415 501 aaPredicted RBP12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L2Q6R6M4 530 aa12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 GTF3C2Q8WUA4 911 aaPredicted RBP12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 APPBP2Q92624 585 aa12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 MORF4L1Q9UBU8 362 aa12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 BRCA2P51587 3418 aa12.52□□□□□ -0.41
PTCD2P1-201ENST00000554393 GREB1LQ9C091 1923 aaPredicted RBP12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 PRKAB2O43741 272 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 MX1P20591 662 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 ANKRD13CQ8N6S4 541 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 PI4K2BQ8TCG2 481 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 FEZ1Q99689 392 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 PUS7LQ9H0K6 701 aaKnown RBP12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 ARPP21Q9UBL0 812 aaPredicted RBP12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 SLC4A4Q9Y6R1 1079 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 SALL3Q9BXA9 1300 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
PTCD2P1-201ENST00000554393 TNPO2O14787 897 aaKnown RBP12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 CHGBP05060 677 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 GRK4P32298 578 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 PRKCZQ05513 592 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 IRF5Q13568 498 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 C12orf60Q5U649 245 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 TSHZ3Q63HK5 1081 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 TMEM179Q6ZVK1 233 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 SLAIN1Q8ND83 568 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 CCDC17Q96LX7 622 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 STRBPQ96SI9 672 aaKnown RBP12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
PTCD2P1-201ENST00000554393 PARP14Q460N5 1801 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L12C9JPN9 530 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L21D6R901 530 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 CYP2D6P10635 497 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 GNAT2P19087 354 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 GUCY1A2P33402 732 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 HERVK_113P62684 666 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 SBK1Q52WX2 424 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 C16orf86Q6ZW13 317 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 PXYLP1Q8TE99 480 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 SH3TC2Q8TF17 1288 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 OSBP2Q969R2 916 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 COA7Q96BR5 231 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 STAP2Q9UGK3 403 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 RLFQ13129 1914 aa12.49□□□□□ -0.41
PTCD2P1-201ENST00000554393 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L15C9J2P7 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L13C9JLJ4 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L11C9JVI0 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L18D6R9N7 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L22D6RA61 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L17D6RBQ6 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L19D6RCP7 530 aa12.48□□□□□ -0.41
PTCD2P1-201ENST00000554393 USP17L20D6RJB6 530 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms