RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 IRX3P78415 501 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-211ENST00000554310 FAM110CQ1W6H9 321 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 SBK1Q52WX2 424 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 CTR9Q6PD62 1173 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 DYNLL2Q96FJ2 89 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 CCDC17Q96LX7 622 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 ASCC2Q9H1I8 757 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-211ENST00000554310 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SHMT2-211ENST00000554310 GREB1LQ9C091 1923 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-211ENST00000554310 GUCY1A2P33402 732 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 PSMC4P43686 418 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 TDO2P48775 406 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 CDK8P49336 464 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 SEPT2Q15019 361 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 TRIM47Q96LD4 638 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 NACAP1Q9BZK3 213 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 EPB41L4AQ9HCS5 686 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-211ENST00000554310 EMILIN3Q9NT22 766 aa15.63■□□□□ 0.09
SHMT2-211ENST00000554310 FMNL1O95466 1100 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-211ENST00000554310 HOXD10P28358 340 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 CTGFP29279 349 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 ANKRD13CQ8N6S4 541 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 GTF3C2Q8WUA4 911 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-211ENST00000554310 ARMC5Q96C12 935 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 OSBPL3Q9H4L5 887 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 SRRDQ9UH36 339 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
SHMT2-211ENST00000554310 PATL2C9JE40 543 aaKnown RBP15.61■□□□□ 0.09
SHMT2-211ENST00000554310 APPP05067 770 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 AKR1B1P15121 316 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 VCAM1P19320 739 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 ICA1Q05084 483 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 PLEKHM2Q8IWE5 1019 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 ACER1Q8TDN7 264 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 SEC62Q99442 399 aaKnown RBP15.61■□□□□ 0.09
SHMT2-211ENST00000554310 SH2D4AQ9H788 454 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 MORF4L1Q9UBU8 362 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 KIAA0100Q14667 2235 aaKnown RBP15.61■□□□□ 0.09
SHMT2-211ENST00000554310 MYPNQ86TC9 1320 aa15.61■□□□□ 0.09
SHMT2-211ENST00000554310 SMIM22K7EJ46 135 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 RGS19P49795 217 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 SOX10P56693 466 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 HERVK_113P62684 666 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 ZYXQ15942 572 aaKnown RBP15.6■□□□□ 0.09
SHMT2-211ENST00000554310 SLC9C1Q4G0N8 1177 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 IFNL3Q8IZI9 196 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 CCDC136Q96JN2 1154 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 ZNF287Q9HBT7 754 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 ARHGEF10LQ9HCE6 1279 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 HELLSQ9NRZ9 838 aa15.6■□□□□ 0.09
SHMT2-211ENST00000554310 MINDY4BA8MYZ0 360 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L15C9J2P7 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L13C9JLJ4 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L11C9JVI0 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L18D6R9N7 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L22D6RA61 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L17D6RBQ6 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L19D6RCP7 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L20D6RJB6 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 TNPO2O14787 897 aaKnown RBP15.59■□□□□ 0.09
SHMT2-211ENST00000554310 ECM2O94769 699 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-211ENST00000554310 USP17L24Q0WX57 530 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 NAPBQ9H115 298 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 A0A0G2JMZ2 1700 aa15.59■□□□□ 0.09
SHMT2-211ENST00000554310 A0A1W2PRG0 241 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 TRIM6-TRIM34B2RNG4 842 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 PRKCZQ05513 592 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 NBPF11Q86T75 865 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 RAET1EQ8TD07 263 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 LPAR1Q92633 364 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 ZNF333Q96JL9 665 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 P2RX7Q99572 595 aaKnown RBP15.58■□□□□ 0.08
SHMT2-211ENST00000554310 KANSL2Q9H9L4 492 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 TMX2Q9Y320 296 aa15.58■□□□□ 0.08
SHMT2-211ENST00000554310 PARP14Q460N5 1801 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 DOCK3Q8IZD9 2030 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 A0A0D9SFI3 127 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 SLC3A2P08195 630 aaKnown RBP15.57■□□□□ 0.08
SHMT2-211ENST00000554310 RASA1P20936 1047 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 CATSPERGQ6ZRH7 1159 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 CCDC129Q6ZRS4 1044 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 CLEC10AQ8IUN9 316 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 COA7Q96BR5 231 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 MKNK2Q9HBH9 465 aa15.57■□□□□ 0.08
SHMT2-211ENST00000554310 FOXP2O15409 715 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 PPARAQ07869 468 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 IRF5Q13568 498 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 MCMDC2Q4G0Z9 681 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 LBX2Q6XYB7 198 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 GPRC5AQ8NFJ5 357 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 FAM227BQ96M60 508 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 RPAP3Q9H6T3 665 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-211ENST00000554310 TXNRD2Q9NNW7 524 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 ZMYM6O95789 1325 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 PLIN4Q96Q06 1357 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 RLFQ13129 1914 aa15.56■□□□□ 0.08
SHMT2-211ENST00000554310 PDE4DIPQ5VU43 2346 aa15.55■□□□□ 0.08
SHMT2-211ENST00000554310 MYH4Q9Y623 1939 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms