RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HMX1Q9NP08 348 aaPredicted RBP22.71■■□□□ 1.23
CPSF2-203ENST00000554290 MCM9Q9NXL9 1143 aa22.71■■□□□ 1.23
CPSF2-203ENST00000554290 SHMT1P34896 483 aa22.7■■□□□ 1.22
CPSF2-203ENST00000554290 ERVK-9P63128 1117 aa22.7■■□□□ 1.22
CPSF2-203ENST00000554290 ERVK-24P63145 666 aa22.7■■□□□ 1.22
CPSF2-203ENST00000554290 PAG1Q9NWQ8 432 aa22.7■■□□□ 1.22
CPSF2-203ENST00000554290 RPTORQ8N122 1335 aa22.7■■□□□ 1.22
CPSF2-203ENST00000554290 TCRBV5S4A2TA0A5A2 114 aa22.69■■□□□ 1.22
CPSF2-203ENST00000554290 PEX10O60683 326 aa22.69■■□□□ 1.22
CPSF2-203ENST00000554290 XRCC5P13010 732 aaKnown RBP22.69■■□□□ 1.22
CPSF2-203ENST00000554290 ATP5JP18859 108 aa22.69■■□□□ 1.22
CPSF2-203ENST00000554290 CYP2B6P20813 491 aa22.69■■□□□ 1.22
CPSF2-203ENST00000554290 TRMT44Q8IYL2 757 aaKnown RBP22.69■■□□□ 1.22
CPSF2-203ENST00000554290 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.69■■□□□ 1.22
CPSF2-203ENST00000554290 BOLA2Q9H3K6 86 aa22.69■■□□□ 1.22
CPSF2-203ENST00000554290 RABGAP1Q9Y3P9 1069 aa22.69■■□□□ 1.22
CPSF2-203ENST00000554290 GABPAQ06546 454 aa22.68■■□□□ 1.22
CPSF2-203ENST00000554290 Q3C1V9 767 aa22.68■■□□□ 1.22
CPSF2-203ENST00000554290 CWC22Q9HCG8 908 aaKnown RBP22.68■■□□□ 1.22
CPSF2-203ENST00000554290 CCNA1P78396 465 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 CATSPERGQ6ZRH7 1159 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 LCORLQ8N3X6 602 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 ANKLE1Q8NAG6 615 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 ACER1Q8TDN7 264 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 SDR42E1Q8WUS8 393 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 TRIB2Q92519 343 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 EDC3Q96F86 508 aaKnown RBP22.67■■□□□ 1.22
CPSF2-203ENST00000554290 DCP1AQ9NPI6 582 aaPredicted RBP22.67■■□□□ 1.22
CPSF2-203ENST00000554290 DOCK3Q8IZD9 2030 aa22.67■■□□□ 1.22
CPSF2-203ENST00000554290 MPHOSPH10O00566 681 aaKnown RBP22.66■■□□□ 1.22
CPSF2-203ENST00000554290 EVI5O60447 810 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 GLRX3O76003 335 aaKnown RBP22.66■■□□□ 1.22
CPSF2-203ENST00000554290 VCAM1P19320 739 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 CHRDL2Q6WN34 429 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 GPR142Q7Z601 462 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 NECAB2Q7Z6G3 386 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 PLEKHH3Q7Z736 793 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 HAUS7Q99871 368 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 LRRCC1Q9C099 1032 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 PORCNQ9H237 461 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 ARMT1Q9H993 441 aa22.66■■□□□ 1.22
CPSF2-203ENST00000554290 ADD2P35612 726 aa22.65■■□□□ 1.22
CPSF2-203ENST00000554290 RGS2P41220 211 aa22.65■■□□□ 1.22
CPSF2-203ENST00000554290 FXR1P51114 621 aaKnown RBP eCLIP22.65■■□□□ 1.22
CPSF2-203ENST00000554290 TRIM32Q13049 653 aa22.65■■□□□ 1.22
CPSF2-203ENST00000554290 SEPT2Q15019 361 aa22.65■■□□□ 1.22
CPSF2-203ENST00000554290 PAWRQ96IZ0 340 aaKnown RBP22.65■■□□□ 1.22
CPSF2-203ENST00000554290 ATP8A2Q9NTI2 1148 aa22.65■■□□□ 1.22
CPSF2-203ENST00000554290 SWAP70Q9UH65 585 aa22.65■■□□□ 1.22
CPSF2-203ENST00000554290 MBD4O95243 580 aa22.64■■□□□ 1.21
CPSF2-203ENST00000554290 ZKSCAN1P17029 563 aaPredicted RBP22.64■■□□□ 1.21
CPSF2-203ENST00000554290 GUCY1A2P33402 732 aa22.64■■□□□ 1.21
CPSF2-203ENST00000554290 MORN1Q5T089 497 aa22.64■■□□□ 1.21
CPSF2-203ENST00000554290 POTEEQ6S8J3 1075 aa22.64■■□□□ 1.21
CPSF2-203ENST00000554290 AMOTL1Q8IY63 956 aa22.64■■□□□ 1.21
CPSF2-203ENST00000554290 USP6NLQ92738 828 aa22.64■■□□□ 1.21
CPSF2-203ENST00000554290 RPAP3Q9H6T3 665 aaPredicted RBP22.64■■□□□ 1.21
CPSF2-203ENST00000554290 PRKAR2AP13861 404 aaKnown RBP22.63■■□□□ 1.21
CPSF2-203ENST00000554290 MAP3K21Q5TCX8 1036 aa22.63■■□□□ 1.21
CPSF2-203ENST00000554290 C20orf194Q5TEA3 1177 aa22.63■■□□□ 1.21
CPSF2-203ENST00000554290 ZSCAN25Q6NSZ9 544 aa22.63■■□□□ 1.21
CPSF2-203ENST00000554290 LBX2Q6XYB7 198 aa22.63■■□□□ 1.21
CPSF2-203ENST00000554290 DDRGK1Q96HY6 314 aa22.63■■□□□ 1.21
CPSF2-203ENST00000554290 UBE3CQ15386 1083 aa22.62■■□□□ 1.21
CPSF2-203ENST00000554290 TMEM179Q6ZVK1 233 aa22.62■■□□□ 1.21
CPSF2-203ENST00000554290 APBA2Q99767 749 aa22.62■■□□□ 1.21
CPSF2-203ENST00000554290 NBPF3Q9H094 633 aa22.62■■□□□ 1.21
CPSF2-203ENST00000554290 DDX60LQ5H9U9 1706 aaKnown RBP22.62■■□□□ 1.21
CPSF2-203ENST00000554290 PRKAB2O43741 272 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 CNMDO75829 334 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 CYP2D6P10635 497 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 EVX2Q03828 476 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 MAP2K5Q13163 448 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 WDR78Q5VTH9 848 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 OGDHLQ9ULD0 1010 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 IVNS1ABPQ9Y6Y0 642 aa22.61■■□□□ 1.21
CPSF2-203ENST00000554290 NAV1Q8NEY1 1877 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 PLXNB2O15031 1838 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 SLC15A5A6NIM6 579 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 CACNB2Q08289 660 aaPredicted RBP22.6■■□□□ 1.21
CPSF2-203ENST00000554290 COG2Q14746 738 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 SLFNL1Q499Z3 407 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 DIS3LQ8TF46 1054 aaKnown RBP22.6■■□□□ 1.21
CPSF2-203ENST00000554290 DYNLL2Q96FJ2 89 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 HOXC10Q9NYD6 342 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 RBM27Q9P2N5 1060 aaKnown RBP22.6■■□□□ 1.21
CPSF2-203ENST00000554290 CEP290O15078 2479 aa22.6■■□□□ 1.21
CPSF2-203ENST00000554290 A0A1W2PRG0 241 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 SPDYE16A6NNV3 312 aaPredicted RBP22.59■■□□□ 1.21
CPSF2-203ENST00000554290 CCL14Q16627 93 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 SLC44A5Q8NCS7 719 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 CCDC17Q96LX7 622 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 TANGO6Q9C0B7 1094 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 SH2D4AQ9H788 454 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 ARHGEF10LQ9HCE6 1279 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 BTBD7Q9P203 1132 aa22.59■■□□□ 1.21
CPSF2-203ENST00000554290 USP17L12C9JPN9 530 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 USP17L21D6R901 530 aa22.58■■□□□ 1.21
CPSF2-203ENST00000554290 SMARCA5O60264 1052 aaPredicted RBP22.58■■□□□ 1.21
CPSF2-203ENST00000554290 PTPREP23469 700 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms