RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 A0A1W2PPZ6 126 aa7□□□□□ -1.29
UBR7-203ENST00000553857 PAX4O43316 350 aa7□□□□□ -1.29
UBR7-203ENST00000553857 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
UBR7-203ENST00000553857 USP5P45974 858 aa7□□□□□ -1.29
UBR7-203ENST00000553857 EXOSC9Q06265 439 aaKnown RBP7□□□□□ -1.29
UBR7-203ENST00000553857 SOX4Q06945 474 aaPredicted RBP7□□□□□ -1.29
UBR7-203ENST00000553857 PCDH1Q08174 1060 aa7□□□□□ -1.29
UBR7-203ENST00000553857 SF3B2Q13435 895 aaKnown RBP7□□□□□ -1.29
UBR7-203ENST00000553857 CCNJLQ8IV13 435 aa7□□□□□ -1.29
UBR7-203ENST00000553857 ABI1Q8IZP0 508 aa7□□□□□ -1.29
UBR7-203ENST00000553857 GATA6Q92908 595 aa7□□□□□ -1.29
UBR7-203ENST00000553857 STK26Q9P289 416 aa7□□□□□ -1.29
UBR7-203ENST00000553857 MROH1Q8NDA8 1641 aa7□□□□□ -1.29
UBR7-203ENST00000553857 ABCC3O15438 1527 aa7□□□□□ -1.29
UBR7-203ENST00000553857 IQSEC2Q5JU85 1478 aa6.99□□□□□ -1.29
UBR7-203ENST00000553857 HSP90AB1P08238 724 aaKnown RBP6.99□□□□□ -1.29
UBR7-203ENST00000553857 MAOBP27338 520 aa6.99□□□□□ -1.29
UBR7-203ENST00000553857 COL19A1Q14993 1142 aa6.99□□□□□ -1.29
UBR7-203ENST00000553857 TRIM56Q9BRZ2 755 aaKnown RBP6.99□□□□□ -1.29
UBR7-203ENST00000553857 CHMP4AQ9BY43 222 aa6.99□□□□□ -1.29
UBR7-203ENST00000553857 LIN7BQ9HAP6 207 aa6.99□□□□□ -1.29
UBR7-203ENST00000553857 NOB1Q9ULX3 412 aaKnown RBP6.99□□□□□ -1.29
UBR7-203ENST00000553857 ACTL7BQ9Y614 415 aa6.99□□□□□ -1.29
UBR7-203ENST00000553857 FAM170BA6NMN3 283 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 ADH5P11766 374 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 FOSL1P15407 271 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 SERPINB4P48594 390 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 USP11P51784 963 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 MFAP1P55081 439 aaKnown RBP6.98□□□□□ -1.29
UBR7-203ENST00000553857 GALNT12Q8IXK2 581 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 SMC5Q8IY18 1101 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 EZH1Q92800 747 aaPredicted RBP6.98□□□□□ -1.29
UBR7-203ENST00000553857 SNX21Q969T3 373 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 PRAM1Q96QH2 718 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 BCL2L13Q9BXK5 485 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 OSBPL1AQ9BXW6 950 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 SLKQ9H2G2 1235 aaPredicted RBP6.98□□□□□ -1.29
UBR7-203ENST00000553857 ATG3Q9NT62 314 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 IFT57Q9NWB7 429 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 LEMD3Q9Y2U8 911 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 ADGRB1O14514 1584 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 GLI2P10070 1586 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 UGGT1Q9NYU2 1555 aa6.98□□□□□ -1.29
UBR7-203ENST00000553857 KIF24Q5T7B8 1368 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 TRIM27P14373 513 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 MRE11P49959 708 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 NUCB1Q02818 461 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 ORC1Q13415 861 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 IDI1Q13907 227 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 NFE2L2Q16236 605 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 BMP2KLQ5H9B9 411 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 ZAR1Q86SH2 424 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 CHD1LQ86WJ1 897 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 SSH1Q8WYL5 1049 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 TRIM44Q96DX7 344 aaPredicted RBP6.97□□□□□ -1.29
UBR7-203ENST00000553857 COG3Q96JB2 828 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 PLEKHF1Q96S99 279 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 CDK19Q9BWU1 502 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
UBR7-203ENST00000553857 CCDC39Q9UFE4 941 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 CAMSAP1Q5T5Y3 1602 aa6.97□□□□□ -1.29
UBR7-203ENST00000553857 YTHDC2Q9H6S0 1430 aaKnown RBP6.96□□□□□ -1.3
UBR7-203ENST00000553857 FYB1O15117 783 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 ICMTO60725 284 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 HMMRO75330 724 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 NFICP08651 508 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 MCM4P33991 863 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 SAFB2Q14151 953 aaKnown RBP eCLIP6.96□□□□□ -1.3
UBR7-203ENST00000553857 PAOXQ6QHF9 649 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 ZBTB40Q9NUA8 1239 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 FAM105AQ9NUU6 356 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 RNF114Q9Y508 228 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 VIRMAQ69YN4 1812 aaKnown RBP6.96□□□□□ -1.3
UBR7-203ENST00000553857 MROH2AA6NES4 1674 aa6.96□□□□□ -1.3
UBR7-203ENST00000553857 A0A1W2PP64 1363 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 H3BRB1 525 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
UBR7-203ENST00000553857 RLBP1P12271 317 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 RAB6AP20340 208 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 RBM25P49756 843 aaKnown RBP6.95□□□□□ -1.3
UBR7-203ENST00000553857 POU4F3Q15319 338 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 AKAP4Q5JQC9 854 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 ANKRD45Q5TZF3 282 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 SKAP1Q86WV1 359 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 TSR2Q969E8 191 aaKnown RBP6.95□□□□□ -1.3
UBR7-203ENST00000553857 SEMA6CQ9H3T2 930 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 TUT1Q9H6E5 874 aaKnown RBP6.95□□□□□ -1.3
UBR7-203ENST00000553857 ATP7BP35670 1465 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 SHPRHQ149N8 1683 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 NEXMIFQ5QGS0 1516 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
UBR7-203ENST00000553857 CDC45O75419 566 aa6.94□□□□□ -1.3
UBR7-203ENST00000553857 REC8O95072 547 aa6.94□□□□□ -1.3
UBR7-203ENST00000553857 PRNPP04156 253 aa6.94□□□□□ -1.3
UBR7-203ENST00000553857 PRKAR2BP31323 418 aa6.94□□□□□ -1.3
UBR7-203ENST00000553857 NUCB2P80303 420 aa6.94□□□□□ -1.3
UBR7-203ENST00000553857 GLIPR1L2Q4G1C9 344 aa6.94□□□□□ -1.3
UBR7-203ENST00000553857 INTS3Q68E01 1043 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms