RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 FBXO46Q6PJ61 603 aaPredicted RBP24.36■■□□□ 1.49
FOXA1-203ENST00000553751 SMCR8Q8TEV9 937 aaPredicted RBP24.36■■□□□ 1.49
FOXA1-203ENST00000553751 NACAP1Q9BZK3 213 aa24.36■■□□□ 1.49
FOXA1-203ENST00000553751 ARHGAP39Q9C0H5 1083 aa24.36■■□□□ 1.49
FOXA1-203ENST00000553751 EFCC1Q9HA90 598 aa24.36■■□□□ 1.49
FOXA1-203ENST00000553751 MINDY4BA8MYZ0 360 aa24.35■■□□□ 1.49
FOXA1-203ENST00000553751 NMIQ13287 307 aaPredicted RBP24.35■■□□□ 1.49
FOXA1-203ENST00000553751 USP17L2Q6R6M4 530 aa24.35■■□□□ 1.49
FOXA1-203ENST00000553751 C12orf42Q96LP6 360 aa24.35■■□□□ 1.49
FOXA1-203ENST00000553751 CCDC17Q96LX7 622 aa24.35■■□□□ 1.49
FOXA1-203ENST00000553751 FEZ1Q99689 392 aa24.35■■□□□ 1.49
FOXA1-203ENST00000553751 KIAA1683Q9H0B3 1180 aa24.35■■□□□ 1.49
FOXA1-203ENST00000553751 ASCC2Q9H1I8 757 aaPredicted RBP24.35■■□□□ 1.49
FOXA1-203ENST00000553751 HOXA7P31268 230 aaPredicted RBP24.34■■□□□ 1.49
FOXA1-203ENST00000553751 ZYXQ15942 572 aaKnown RBP24.34■■□□□ 1.49
FOXA1-203ENST00000553751 HPS5Q9UPZ3 1129 aa24.34■■□□□ 1.49
FOXA1-203ENST00000553751 GREB1LQ9C091 1923 aaPredicted RBP24.33■■□□□ 1.49
FOXA1-203ENST00000553751 SDSP20132 328 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 CTGFP29279 349 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 USP14P54578 494 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 KIF22Q14807 665 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 MCMDC2Q4G0Z9 681 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 VPS53Q5VIR6 699 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 CLEC10AQ8IUN9 316 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 NAPBQ9H115 298 aa24.33■■□□□ 1.49
FOXA1-203ENST00000553751 A0A1W2PRG0 241 aa24.32■■□□□ 1.48
FOXA1-203ENST00000553751 RASA1P20936 1047 aa24.32■■□□□ 1.48
FOXA1-203ENST00000553751 OSBPP22059 807 aa24.32■■□□□ 1.48
FOXA1-203ENST00000553751 ZNF589Q86UQ0 364 aaPredicted RBP24.32■■□□□ 1.48
FOXA1-203ENST00000553751 STK11IPQ8N1F8 1099 aa24.32■■□□□ 1.48
FOXA1-203ENST00000553751 PTPN22Q9Y2R2 807 aa24.32■■□□□ 1.48
FOXA1-203ENST00000553751 GSPT1P15170 499 aaKnown RBP24.31■■□□□ 1.48
FOXA1-203ENST00000553751 ICA1Q05084 483 aa24.31■■□□□ 1.48
FOXA1-203ENST00000553751 ARHGEF6Q15052 776 aa24.31■■□□□ 1.48
FOXA1-203ENST00000553751 TTC22Q5TAA0 569 aa24.31■■□□□ 1.48
FOXA1-203ENST00000553751 SIAH1Q8IUQ4 282 aa24.31■■□□□ 1.48
FOXA1-203ENST00000553751 TRIM47Q96LD4 638 aa24.31■■□□□ 1.48
FOXA1-203ENST00000553751 CCDC85CA6NKD9 419 aa24.3■■□□□ 1.48
FOXA1-203ENST00000553751 VCAM1P19320 739 aa24.3■■□□□ 1.48
FOXA1-203ENST00000553751 IRX3P78415 501 aaPredicted RBP24.3■■□□□ 1.48
FOXA1-203ENST00000553751 PPARAQ07869 468 aa24.3■■□□□ 1.48
FOXA1-203ENST00000553751 ANKRD13CQ8N6S4 541 aa24.3■■□□□ 1.48
FOXA1-203ENST00000553751 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.3■■□□□ 1.48
FOXA1-203ENST00000553751 CCDC171Q6TFL3 1326 aa24.3■■□□□ 1.48
FOXA1-203ENST00000553751 ECM2O94769 699 aaPredicted RBP24.29■■□□□ 1.48
FOXA1-203ENST00000553751 GNRH1P01148 92 aa24.29■■□□□ 1.48
FOXA1-203ENST00000553751 PSMC4P43686 418 aa24.29■■□□□ 1.48
FOXA1-203ENST00000553751 GCLCP48506 637 aaPredicted RBP24.29■■□□□ 1.48
FOXA1-203ENST00000553751 FAM110CQ1W6H9 321 aa24.29■■□□□ 1.48
FOXA1-203ENST00000553751 MKNK2Q9HBH9 465 aa24.29■■□□□ 1.48
FOXA1-203ENST00000553751 PRDM1O75626 825 aa24.28■■□□□ 1.48
FOXA1-203ENST00000553751 P2RX7Q99572 595 aaKnown RBP24.28■■□□□ 1.48
FOXA1-203ENST00000553751 KANSL2Q9H9L4 492 aa24.28■■□□□ 1.48
FOXA1-203ENST00000553751 ARHGEF10LQ9HCE6 1279 aa24.28■■□□□ 1.48
FOXA1-203ENST00000553751 MGAMO43451 1857 aa24.28■■□□□ 1.48
FOXA1-203ENST00000553751 HERVK_113P62684 666 aa24.27■■□□□ 1.48
FOXA1-203ENST00000553751 ALX1Q15699 326 aa24.27■■□□□ 1.48
FOXA1-203ENST00000553751 ZNF287Q9HBT7 754 aa24.27■■□□□ 1.48
FOXA1-203ENST00000553751 DIAPH3Q9NSV4 1193 aa24.27■■□□□ 1.48
FOXA1-203ENST00000553751 TMX2Q9Y320 296 aa24.27■■□□□ 1.48
FOXA1-203ENST00000553751 ZMYM6O95789 1325 aa24.27■■□□□ 1.48
FOXA1-203ENST00000553751 USP17L15C9J2P7 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L13C9JLJ4 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L11C9JVI0 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L18D6R9N7 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L22D6RA61 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L17D6RBQ6 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L19D6RCP7 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L20D6RJB6 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 HIP1O00291 1037 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 HSPD1P10809 573 aaKnown RBP24.26■■□□□ 1.47
FOXA1-203ENST00000553751 FCGRTP55899 365 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 USP17L24Q0WX57 530 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 KIAA1755Q5JYT7 1200 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 SH2D4AQ9H788 454 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 MORF4L1Q9UBU8 362 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 PTCH2Q9Y6C5 1203 aa24.26■■□□□ 1.47
FOXA1-203ENST00000553751 FMNL1O95466 1100 aaPredicted RBP24.25■■□□□ 1.47
FOXA1-203ENST00000553751 SLC3A2P08195 630 aaKnown RBP24.25■■□□□ 1.47
FOXA1-203ENST00000553751 EEF2P13639 858 aaKnown RBP24.25■■□□□ 1.47
FOXA1-203ENST00000553751 PDE4BQ07343 736 aa24.25■■□□□ 1.47
FOXA1-203ENST00000553751 POTEEQ6S8J3 1075 aa24.25■■□□□ 1.47
FOXA1-203ENST00000553751 CWC27Q6UX04 472 aaKnown RBP24.25■■□□□ 1.47
FOXA1-203ENST00000553751 CATSPERGQ6ZRH7 1159 aa24.25■■□□□ 1.47
FOXA1-203ENST00000553751 RPAP3Q9H6T3 665 aaPredicted RBP24.25■■□□□ 1.47
FOXA1-203ENST00000553751 SRRDQ9UH36 339 aa24.25■■□□□ 1.47
FOXA1-203ENST00000553751 ANAPC4Q9UJX5 808 aa24.25■■□□□ 1.47
FOXA1-203ENST00000553751 PLIN4Q96Q06 1357 aa24.25■■□□□ 1.47
FOXA1-203ENST00000553751 IGKV6D-41A0A0C4DH26 115 aa24.24■■□□□ 1.47
FOXA1-203ENST00000553751 FGAP02671 866 aa24.24■■□□□ 1.47
FOXA1-203ENST00000553751 CTDSPL2Q05D32 466 aa24.24■■□□□ 1.47
FOXA1-203ENST00000553751 CENPQQ7L2Z9 268 aaPredicted RBP24.24■■□□□ 1.47
FOXA1-203ENST00000553751 VCPKMTQ9H867 229 aa24.24■■□□□ 1.47
FOXA1-203ENST00000553751 TXNRD2Q9NNW7 524 aa24.24■■□□□ 1.47
FOXA1-203ENST00000553751 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.24■■□□□ 1.47
FOXA1-203ENST00000553751 PEX10O60683 326 aa24.23■■□□□ 1.47
FOXA1-203ENST00000553751 MFAP1P55081 439 aaKnown RBP24.23■■□□□ 1.47
FOXA1-203ENST00000553751 PRMT2P55345 433 aa24.23■■□□□ 1.47
FOXA1-203ENST00000553751 ZNF444Q8N0Y2 327 aaPredicted RBP24.23■■□□□ 1.47
FOXA1-203ENST00000553751 GTF3C2Q8WUA4 911 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms