RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 NMT2O60551 498 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 KDM4AO75164 1064 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 ANTXR2P58335 489 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 CEP95Q96GE4 821 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 MTMR4Q9NYA4 1195 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 ZSWIM5Q9P217 1185 aa17.56■□□□□ 0.4
MTHFD1-204ENST00000553405 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 ECE1P42892 770 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 RAB3GAP1Q15042 981 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 ZNF280CQ8ND82 737 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 KRT23Q9C075 422 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 CNNM2Q9H8M5 875 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 CABP5Q9NP86 173 aa17.55■□□□□ 0.4
MTHFD1-204ENST00000553405 WDR33Q9C0J8 1336 aaKnown RBP17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 A0A0G2JLL6 359 aaPredicted RBP17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 CXCL11O14625 94 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 AOC2O75106 756 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 TSPY3P0CV98 308 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 TSPY8P0CW00 308 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 EEF2P13639 858 aaKnown RBP17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 BACE1P56817 501 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 ICA1Q05084 483 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 SPP2Q13103 211 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 DGKZQ13574 1117 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 SH3D19Q5HYK7 790 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 RNF20Q5VTR2 975 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 PRRT2Q7Z6L0 340 aaPredicted RBP17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 ANKS1AQ92625 1134 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 ESR2Q92731 530 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 MKL1Q969V6 931 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 NYAP2Q9P242 653 aa17.54■□□□□ 0.4
MTHFD1-204ENST00000553405 TRIM75PA6NK02 468 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 TSPY2A6NKD2 308 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 MKRN3Q13064 507 aaKnown RBP17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 SEC23AQ15436 765 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 BRI3BPQ8WY22 251 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 PTPN18Q99952 460 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 KIAA1683Q9H0B3 1180 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 TMX2Q9Y320 296 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
MTHFD1-204ENST00000553405 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 KIF23Q02241 960 aaPredicted RBP17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 NOGQ13253 232 aa17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 ENAHQ8N8S7 591 aaPredicted RBP17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 C12orf42Q96LP6 360 aa17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 AS3MTQ9HBK9 375 aa17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 TOMM22Q9NS69 142 aa17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 EMILIN3Q9NT22 766 aa17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
MTHFD1-204ENST00000553405 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 ANAPC15P60006 121 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 SNAPC2Q13487 334 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 MTMR2Q13614 643 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 GPAT2Q6NUI2 795 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 KIF2CQ99661 725 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 SYNPO2Q9UMS6 1093 aa17.51■□□□□ 0.39
MTHFD1-204ENST00000553405 USP17L10C9JJH3 530 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 IGF2BP3O00425 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 TTLL1O95922 423 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 MAP2K2P36507 400 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 TM4SF4P48230 202 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 GTF2A2P52657 109 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 HMGCS2P54868 508 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 KRT32Q14532 448 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 IGDCC4Q8TDY8 1250 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 MTA3Q9BTC8 594 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 GPHNQ9NQX3 736 aaPredicted RBP17.5■□□□□ 0.39
MTHFD1-204ENST00000553405 TNKSO95271 1327 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 WDR19Q8NEZ3 1342 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 RLFQ13129 1914 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 C19orf81C9J6K1 198 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 CPA1P15085 419 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 TRDNQ13061 729 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 PAXIP1Q6ZW49 1069 aaPredicted RBP17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 CHST3Q7LGC8 479 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 RALYLQ86SE5 291 aaKnown RBP17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 DGKHQ86XP1 1220 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 TTC14Q96N46 770 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 TMEM47Q9BQJ4 181 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 ZSWIM6Q9HCJ5 1215 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
MTHFD1-204ENST00000553405 CCL15-CCL14A0A0B4J2E2 113 aa17.48■□□□□ 0.39
MTHFD1-204ENST00000553405 PRC1O43663 620 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms