RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PLCG1P19174 1290 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 CD97P48960 835 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 SOX4Q06945 474 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-209ENST00000553280 PDE3AQ14432 1141 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 NFKBIBQ15653 356 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 PTPROQ16827 1216 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 AKAP4Q5JQC9 854 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 CDCP2Q5VXM1 449 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 FBXL6Q8N531 539 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 JMYQ8N9B5 988 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 C2CD4AQ8NCU7 369 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-209ENST00000553280 APPBP2Q92624 585 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 ELMO3Q96BJ8 720 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 ZNF669Q96BR6 464 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-209ENST00000553280 BRINP2Q9C0B6 783 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 CNNM2Q9H8M5 875 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 FAM95CA0A1B0GW59 222 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 PRR19A6NJB7 356 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 SLFN14P0C7P3 912 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 ADH5P11766 374 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 NME1P15531 152 aaKnown RBP7.27□□□□□ -1.25
SCFD1-209ENST00000553280 RING1Q06587 406 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 MTERF2Q49AM1 385 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 C6orf15Q6UXA7 325 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-209ENST00000553280 HOMER1Q86YM7 354 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 ST13P5Q8NFI4 369 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-209ENST00000553280 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 TMX1Q9H3N1 280 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 RAD18Q9NS91 495 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 TMEM260Q9NX78 707 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 ADAM30Q9UKF2 790 aa7.27□□□□□ -1.25
SCFD1-209ENST00000553280 ESYT3A0FGR9 886 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 DCDC2CA8MYV0 355 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 ACRP10323 421 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 OVOS1Q6IE37 1185 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 UNC5AQ6ZN44 842 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 NLRC3Q7RTR2 1065 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 DYMQ7RTS9 669 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 C12orf40Q86WS4 652 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 SHISA5Q8N114 240 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 THAP3Q8WTV1 239 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-209ENST00000553280 AP4E1Q9UPM8 1137 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 PCDHGC5Q9Y5F6 944 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
SCFD1-209ENST00000553280 UPK3BL1B0FP48 263 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 B2RBV5 119 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 UPK3BL2E5RIL1 263 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 TNFRSF10CO14798 259 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 DNAJA2O60884 412 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 AOC2O75106 756 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 RAB6AP20340 208 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 GRIK1P39086 918 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 ERVK-24P63145 666 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 SQSTM1Q13501 440 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 NCAPHQ15003 741 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 C2orf27AQ580R0 203 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 ARSHQ5FYA8 562 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 KIAA0907Q7Z7F0 614 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-209ENST00000553280 SLC9A7Q96T83 725 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 WDR18Q9BV38 432 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 SLKQ9H2G2 1235 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-209ENST00000553280 PHAXQ9H814 394 aaKnown RBP7.25□□□□□ -1.25
SCFD1-209ENST00000553280 IFT57Q9NWB7 429 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 ZMYM5Q9UJ78 669 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 ACTL7BQ9Y614 415 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 KDM2BQ8NHM5 1336 aa7.25□□□□□ -1.25
SCFD1-209ENST00000553280 F13BP05160 661 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 PGRP06401 933 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 IBSPP21815 317 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-209ENST00000553280 GRK4P32298 578 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 ZYXQ15942 572 aaKnown RBP7.24□□□□□ -1.25
SCFD1-209ENST00000553280 MRM1Q6IN84 353 aaKnown RBP7.24□□□□□ -1.25
SCFD1-209ENST00000553280 PAOXQ6QHF9 649 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 C16orf86Q6ZW13 317 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 SPATC1Q76KD6 591 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 EEPD1Q7L9B9 569 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 ZCRB1Q8TBF4 217 aaKnown RBP7.24□□□□□ -1.25
SCFD1-209ENST00000553280 SPC25Q9HBM1 224 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 LEMD3Q9Y2U8 911 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 PRKAB1Q9Y478 270 aa7.24□□□□□ -1.25
SCFD1-209ENST00000553280 CHURC1-FNTBB4DL54 471 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 PPP1R12AO14974 1030 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-209ENST00000553280 FANCGO15287 622 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 DIAPH1O60610 1272 aaKnown RBP7.23□□□□□ -1.25
SCFD1-209ENST00000553280 DNAJC6O75061 913 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 NFICP08651 508 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 HOXA10P31260 410 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-209ENST00000553280 IGBP1P78318 339 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 VHLLQ6RSH7 139 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 FILIP1Q7Z7B0 1213 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 MCATQ8IVS2 390 aaKnown RBP7.23□□□□□ -1.25
SCFD1-209ENST00000553280 YIPF2Q9BWQ6 316 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 PFDN2Q9UHV9 154 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 NOP58Q9Y2X3 529 aaKnown RBP7.23□□□□□ -1.25
SCFD1-209ENST00000553280 CSADQ9Y600 493 aa7.23□□□□□ -1.25
SCFD1-209ENST00000553280 hCG_2014768A0A024R1R8 64 aa7.22□□□□□ -1.25
SCFD1-209ENST00000553280 PRAMEF27A3QJZ7 478 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms