RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 DHX36Q9H2U1 1008 aaKnown RBP15.95■□□□□ 0.14
VPS29-211ENST00000553128 MSCO60682 206 aa15.94■□□□□ 0.14
VPS29-211ENST00000553128 GH2P01242 217 aa15.94■□□□□ 0.14
VPS29-211ENST00000553128 GRIN2CQ14957 1233 aa15.94■□□□□ 0.14
VPS29-211ENST00000553128 SNX17Q15036 470 aa15.94■□□□□ 0.14
VPS29-211ENST00000553128 CRACR2BQ8N4Y2 399 aaPredicted RBP15.94■□□□□ 0.14
VPS29-211ENST00000553128 MEIS3Q99687 375 aa15.94■□□□□ 0.14
VPS29-211ENST00000553128 SAP30BPQ9UHR5 308 aaKnown RBP15.94■□□□□ 0.14
VPS29-211ENST00000553128 TNFRSF10AO00220 468 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
VPS29-211ENST00000553128 ARID4AP29374 1257 aaPredicted RBP15.93■□□□□ 0.14
VPS29-211ENST00000553128 TJAP1Q5JTD0 557 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 CATSPERGQ6ZRH7 1159 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 FOXP4Q8IVH2 680 aaPredicted RBP15.93■□□□□ 0.14
VPS29-211ENST00000553128 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 C12orf42Q96LP6 360 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 LRP2BPQ9P2M1 347 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 AKAP2Q9Y2D5 859 aa15.93■□□□□ 0.14
VPS29-211ENST00000553128 USP17L15C9J2P7 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L13C9JLJ4 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L11C9JVI0 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L18D6R9N7 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L22D6RA61 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L17D6RBQ6 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L19D6RCP7 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L20D6RJB6 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 GLRX3O76003 335 aaKnown RBP15.92■□□□□ 0.14
VPS29-211ENST00000553128 ADCYAP1R1P41586 468 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 CCNA1P78396 465 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 USP17L24Q0WX57 530 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 ACER1Q8TDN7 264 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 SNRKQ9NRH2 765 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 GINM1Q9NU53 330 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 XIRP2A4UGR9 3374 aa15.92■□□□□ 0.14
VPS29-211ENST00000553128 CDK5RAP2Q96SN8 1893 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 SPDYE16A6NNV3 312 aaPredicted RBP15.91■□□□□ 0.14
VPS29-211ENST00000553128 KBTBD13C9JR72 458 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 VCAM1P19320 739 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 PPP4CP60510 307 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 PRAMEF19Q5SWL8 479 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 NAA16Q6N069 864 aaPredicted RBP15.91■□□□□ 0.14
VPS29-211ENST00000553128 ARRDC4Q8NCT1 418 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
VPS29-211ENST00000553128 TRIM34Q9BYJ4 488 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 IVNS1ABPQ9Y6Y0 642 aa15.91■□□□□ 0.14
VPS29-211ENST00000553128 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 DYNLL1P63167 89 aaKnown RBP15.9■□□□□ 0.14
VPS29-211ENST00000553128 TLE2Q04725 743 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 LRRC41Q15345 812 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 LBX2Q6XYB7 198 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 FEZ1Q99689 392 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 NOL10Q9BSC4 688 aaKnown RBP15.9■□□□□ 0.14
VPS29-211ENST00000553128 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
VPS29-211ENST00000553128 SEPT4O43236 478 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 COBLO75128 1261 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 BAG3O95817 575 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 ADORA2AP29274 412 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 RAB3GAP1Q15042 981 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 FAM47AQ5JRC9 791 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
VPS29-211ENST00000553128 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
VPS29-211ENST00000553128 TMEM265A0A087WTH1 108 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 DNAJB2P25686 324 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 ALDH1L2Q3SY69 923 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 C1orf53Q5VUE5 145 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 OLFML2BQ68BL8 750 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 DPP9Q86TI2 863 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 PPM1EQ8WY54 764 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 MOV10L1Q9BXT6 1211 aaKnown RBP15.88■□□□□ 0.13
VPS29-211ENST00000553128 RPAP3Q9H6T3 665 aaPredicted RBP15.88■□□□□ 0.13
VPS29-211ENST00000553128 REV3LO60673 3130 aa15.88■□□□□ 0.13
VPS29-211ENST00000553128 CYP2E1P05181 493 aaPredicted RBP15.87■□□□□ 0.13
VPS29-211ENST00000553128 HLA-DOAP06340 250 aa15.87■□□□□ 0.13
VPS29-211ENST00000553128 PLCG2P16885 1265 aa15.87■□□□□ 0.13
VPS29-211ENST00000553128 TATDN1Q6P1N9 297 aa15.87■□□□□ 0.13
VPS29-211ENST00000553128 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
VPS29-211ENST00000553128 CLTBP09497 229 aa15.86■□□□□ 0.13
VPS29-211ENST00000553128 GUCY1A2P33402 732 aa15.86■□□□□ 0.13
VPS29-211ENST00000553128 USP14P54578 494 aa15.86■□□□□ 0.13
VPS29-211ENST00000553128 ZNF576Q9H609 170 aa15.86■□□□□ 0.13
VPS29-211ENST00000553128 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 E9PSI1 815 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 KIAA0355O15063 1070 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 UQCRFS1P1P0C7P4 283 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 ERCC3P19447 782 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 PLA2G5P39877 138 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 SLFN5Q08AF3 891 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 MTX1Q13505 466 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 CDCA7LQ96GN5 454 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 PIH1D3Q9NQM4 214 aaKnown RBP15.85■□□□□ 0.13
VPS29-211ENST00000553128 TACC3Q9Y6A5 838 aa15.85■□□□□ 0.13
VPS29-211ENST00000553128 MYO5AQ9Y4I1 1855 aaKnown RBP15.84■□□□□ 0.13
VPS29-211ENST00000553128 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
VPS29-211ENST00000553128 RAG1P15918 1043 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 PBX2P40425 430 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 FPGSQ05932 587 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms