RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 FANCBQ8NB91 859 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 C8orf76Q96K31 380 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.21
ACTR6-213ENST00000553038 VEZTQ9HBM0 779 aa16.33■□□□□ 0.21
ACTR6-213ENST00000553038 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.2
ACTR6-213ENST00000553038 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 SPDYE2BA6NHP3 402 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
ACTR6-213ENST00000553038 MYO1BO43795 1136 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 SPDYE6P0CI01 402 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 CTCFLQ8NI51 663 aaPredicted RBP16.33■□□□□ 0.2
ACTR6-213ENST00000553038 GMLQ99445 158 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 IDI2Q9BXS1 227 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
ACTR6-213ENST00000553038 SWAP70Q9UH65 585 aa16.33■□□□□ 0.2
ACTR6-213ENST00000553038 PSME4Q14997 1843 aa16.32■□□□□ 0.2
ACTR6-213ENST00000553038 ZNF445P59923 1031 aa16.32■□□□□ 0.2
ACTR6-213ENST00000553038 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
ACTR6-213ENST00000553038 CMTR1Q8N1G2 835 aaKnown RBP16.32■□□□□ 0.2
ACTR6-213ENST00000553038 FTOQ9C0B1 505 aaKnown RBP eCLIP16.32■□□□□ 0.2
ACTR6-213ENST00000553038 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
ACTR6-213ENST00000553038 ECM29Q5VYK3 1845 aa16.32■□□□□ 0.2
ACTR6-213ENST00000553038 DDAH1O94760 285 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 CLCN1P35523 988 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 RBM26Q5T8P6 1007 aaKnown RBP16.31■□□□□ 0.2
ACTR6-213ENST00000553038 FBXO18Q8NFZ0 1043 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 LEO1Q8WVC0 666 aaPredicted RBP16.31■□□□□ 0.2
ACTR6-213ENST00000553038 SYCE3A1L190 88 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 RCAN1P53805 252 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
ACTR6-213ENST00000553038 TRIM29Q14134 588 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 DGKHQ86XP1 1220 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 ALG1Q9BT22 464 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 IL17RBQ9NRM6 502 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 RBM28Q9NW13 759 aaKnown RBP16.31■□□□□ 0.2
ACTR6-213ENST00000553038 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
ACTR6-213ENST00000553038 DDTLA6NHG4 134 aaPredicted RBP16.3■□□□□ 0.2
ACTR6-213ENST00000553038 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 PNMA1Q8ND90 353 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 NEDD1Q8NHV4 660 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 WASF1Q92558 559 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 GRPEL1Q9HAV7 217 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 ZNF70Q9UC06 446 aaPredicted RBP16.3■□□□□ 0.2
ACTR6-213ENST00000553038 NID2Q14112 1375 aa16.3■□□□□ 0.2
ACTR6-213ENST00000553038 KIF28PB7ZC32 967 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 ENTPD3O75355 529 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 GUCY1A2P33402 732 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 PPP2R5BQ15173 497 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 MYOZ2Q9NPC6 264 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
ACTR6-213ENST00000553038 AKR1B1P15121 316 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 IFNAR1P17181 557 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 KIF5BP33176 963 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
ACTR6-213ENST00000553038 ATP2B2Q01814 1243 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 GABPAQ06546 454 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
ACTR6-213ENST00000553038 PGBD1Q96JS3 809 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 SCAND2PQ9GZW5 306 aaPredicted RBP16.29■□□□□ 0.2
ACTR6-213ENST00000553038 ELP1O95163 1332 aa16.29■□□□□ 0.2
ACTR6-213ENST00000553038 SHTN1A0MZ66 631 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
ACTR6-213ENST00000553038 RCSD1Q6JBY9 416 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 NBPF11Q86T75 865 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 CEP95Q96GE4 821 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 EHD4Q9H223 541 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 ARFGEF1Q9Y6D6 1849 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
ACTR6-213ENST00000553038 TROAPQ12815 778 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 TMEM47Q9BQJ4 181 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 SYT17Q9BSW7 474 aa16.28■□□□□ 0.2
ACTR6-213ENST00000553038 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 SLURP2P0DP57 97 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 LIG1P18858 919 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 LMNB1P20700 586 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 SHMT1P34896 483 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 PRELPP51888 382 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 KRT40Q6A162 431 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 SH3BP5LQ7L8J4 393 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 PIBF1Q8WXW3 757 aa16.27■□□□□ 0.2
ACTR6-213ENST00000553038 FZD9O00144 591 aa16.26■□□□□ 0.19
ACTR6-213ENST00000553038 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
ACTR6-213ENST00000553038 CERKLQ49MI3 558 aaPredicted RBP16.26■□□□□ 0.19
ACTR6-213ENST00000553038 LRSAM1Q6UWE0 723 aa16.26■□□□□ 0.19
ACTR6-213ENST00000553038 FOXP4Q8IVH2 680 aaPredicted RBP16.26■□□□□ 0.19
ACTR6-213ENST00000553038 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
ACTR6-213ENST00000553038 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
ACTR6-213ENST00000553038 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
ACTR6-213ENST00000553038 RAD21O60216 631 aa16.26■□□□□ 0.19
ACTR6-213ENST00000553038 DEXIO95424 95 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms