RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
TMEM116-217ENST00000552801 DBNDD2Q9BQY9 259 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 PAGR1Q9BTK6 254 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 WDR18Q9BV38 432 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
TMEM116-217ENST00000552801 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 RPTORQ8N122 1335 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
TMEM116-217ENST00000552801 ZKSCAN1P17029 563 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-217ENST00000552801 MAPK4P31152 587 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 PPP4CP60510 307 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 CCNA1P78396 465 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 ATP8B2P98198 1209 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 HNRNPUQ00839 825 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMEM116-217ENST00000552801 MAP3K12Q12852 859 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L2Q6R6M4 530 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 C7orf61Q8IZ16 206 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 CABP5Q9NP86 173 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 PAK6Q9NQU5 681 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-217ENST00000552801 ZBTB21Q9ULJ3 1066 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
TMEM116-217ENST00000552801 SNPHO15079 494 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 RGS2P41220 211 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 ZAP70P43403 619 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 USP14P54578 494 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 HERVK_113P62684 666 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 RAB3GAP1Q15042 981 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 TTC6Q86TZ1 520 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 MAGEB6Q8N7X4 407 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 MIGA1Q8NAN2 632 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 ZNF384Q8TF68 577 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 CCDC8Q9H0W5 538 aaPredicted RBP10.57□□□□□ -0.72
TMEM116-217ENST00000552801 IVNS1ABPQ9Y6Y0 642 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 MYH1P12882 1939 aa10.57□□□□□ -0.72
TMEM116-217ENST00000552801 A0A1W2PPC1 479 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 CYP2E1P05181 493 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 POLR3DP05423 398 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 HOXA7P31268 230 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 ZYXQ15942 572 aaKnown RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 HSP90AB4PQ58FF6 505 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 UBE2Q1Q7Z7E8 422 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 SSH3Q8TE77 659 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 ZNF512BQ96KM6 892 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 P2RX7Q99572 595 aaKnown RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 CRISPLD2Q9H0B8 497 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 C11orf49Q9H6J7 331 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 SERPINB13Q9UIV8 391 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 TNNQ9UQP3 1299 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.56□□□□□ -0.72
TMEM116-217ENST00000552801 FOCADQ5VW36 1801 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 CDK5RAP2Q96SN8 1893 aa10.56□□□□□ -0.72
TMEM116-217ENST00000552801 C2orf72A6NCS6 295 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 GH2P01242 217 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 MS4A1P11836 297 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 ERVK-24P63145 666 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 DYNLL1P63167 89 aaKnown RBP10.55□□□□□ -0.72
TMEM116-217ENST00000552801 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
TMEM116-217ENST00000552801 CERKLQ49MI3 558 aaPredicted RBP10.55□□□□□ -0.72
TMEM116-217ENST00000552801 TMED8Q6PL24 325 aaPredicted RBP10.55□□□□□ -0.72
TMEM116-217ENST00000552801 PLEKHH3Q7Z736 793 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 AACSQ86V21 672 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 PIH1D3Q9NQM4 214 aaKnown RBP10.55□□□□□ -0.72
TMEM116-217ENST00000552801 STAP2Q9UGK3 403 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 CEP290O15078 2479 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 BRCA2P51587 3418 aa10.55□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L15C9J2P7 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L13C9JLJ4 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L11C9JVI0 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L18D6R9N7 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L22D6RA61 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L17D6RBQ6 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L19D6RCP7 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L20D6RJB6 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 MPHOSPH10O00566 681 aaKnown RBP10.54□□□□□ -0.72
TMEM116-217ENST00000552801 XRCC5P13010 732 aaKnown RBP10.54□□□□□ -0.72
TMEM116-217ENST00000552801 USP17L24Q0WX57 530 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 RRP1BQ14684 758 aaKnown RBP10.54□□□□□ -0.72
TMEM116-217ENST00000552801 ABCB5Q2M3G0 1257 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 MFSD14CQ5VZR4 134 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 APBA2Q99767 749 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 DBNLQ9UJU6 430 aaKnown RBP10.54□□□□□ -0.72
TMEM116-217ENST00000552801 ZMYND8Q9ULU4 1186 aaPredicted RBP10.54□□□□□ -0.72
TMEM116-217ENST00000552801 MYO5AQ9Y4I1 1855 aaKnown RBP10.54□□□□□ -0.72
TMEM116-217ENST00000552801 TRIOBPQ9H2D6 2365 aa10.54□□□□□ -0.72
TMEM116-217ENST00000552801 MAGEB6P1A0A0J9YX57 407 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 HMMRO75330 724 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 IFIT2P09913 472 aaKnown RBP10.53□□□□□ -0.72
TMEM116-217ENST00000552801 PDE4AP27815 886 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 CNGA1P29973 690 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 GPR142Q7Z601 462 aa10.53□□□□□ -0.72
TMEM116-217ENST00000552801 ADGRA1Q86SQ6 560 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms