RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 FANCBQ8NB91 859 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 RGS22Q8NE09 1264 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00661-206ENST00000552608 SENP2Q9HC62 589 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 STX8Q9UNK0 236 aa12.75□□□□□ -0.37
LINC00661-206ENST00000552608 CNTNAP1P78357 1384 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 TBC1D12O60347 775 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 RXRAP19793 462 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 GNAQP50148 359 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 AKAP17AQ02040 695 aaKnown RBP12.74□□□□□ -0.37
LINC00661-206ENST00000552608 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
LINC00661-206ENST00000552608 TATDN1Q6P1N9 297 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 PNMA1Q8ND90 353 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 TNPO1Q92973 898 aaKnown RBP12.74□□□□□ -0.37
LINC00661-206ENST00000552608 DDX11Q96FC9 970 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 IL17RBQ9NRM6 502 aa12.74□□□□□ -0.37
LINC00661-206ENST00000552608 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-206ENST00000552608 NMT2O60551 498 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 JAK2O60674 1132 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 CTDNEP1O95476 244 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 TTLL1O95922 423 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-206ENST00000552608 AKR1B1P15121 316 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 IFNAR1P17181 557 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
LINC00661-206ENST00000552608 TROAPQ12815 778 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 ABCB5Q2M3G0 1257 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 TMEM179Q6ZVK1 233 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 TMEM47Q9BQJ4 181 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 LZTS2Q9BRK4 669 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 ADARB2Q9NS39 739 aaKnown RBP12.73□□□□□ -0.37
LINC00661-206ENST00000552608 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
LINC00661-206ENST00000552608 ORC3Q9UBD5 711 aaPredicted RBP12.73□□□□□ -0.37
LINC00661-206ENST00000552608 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 SCN4AP35499 1836 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 ATAD5Q96QE3 1844 aa12.73□□□□□ -0.37
LINC00661-206ENST00000552608 IGKV6D-41A0A0C4DH26 115 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 SHTN1A0MZ66 631 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-206ENST00000552608 DEXIO95424 95 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-206ENST00000552608 CDC27P30260 824 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 NOVP48745 357 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 TRIM29Q14134 588 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 RASA3Q14644 834 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
LINC00661-206ENST00000552608 DNAJC18Q9H819 358 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 KANSL2Q9H9L4 492 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 MYH15Q9Y2K3 1946 aa12.72□□□□□ -0.37
LINC00661-206ENST00000552608 PITPNM2Q9BZ72 1349 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 DDX11L8A8MPP1 907 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 F13A1P00488 732 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 XBP1P17861 261 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 GRM4Q14833 912 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 NTRK3Q16288 839 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 DCAF15Q66K64 600 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 C8orf76Q96K31 380 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 SLC26A6Q9BXS9 759 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 GINM1Q9NU53 330 aa12.71□□□□□ -0.37
LINC00661-206ENST00000552608 PARP1P09874 1014 aaKnown RBP12.7□□□□□ -0.38
LINC00661-206ENST00000552608 NFKBIBQ15653 356 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
LINC00661-206ENST00000552608 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 ZSCAN16Q9H4T2 348 aaPredicted RBP12.7□□□□□ -0.38
LINC00661-206ENST00000552608 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
LINC00661-206ENST00000552608 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
LINC00661-206ENST00000552608 IQCA1LA6NCM1 817 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 FAM196BA6NMK8 535 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 PRPF3O43395 683 aaKnown RBP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 GDF11O95390 407 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 EGFRP00533 1210 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 FDPSP14324 419 aaKnown RBP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 EPS15P42566 896 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 ATP2B2Q01814 1243 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 MAP3K10Q02779 954 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 ICA1Q05084 483 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 PKP1Q13835 747 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 ASPRV1Q53RT3 343 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
LINC00661-206ENST00000552608 TRPM4Q8TD43 1214 aa12.69□□□□□ -0.38
LINC00661-206ENST00000552608 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms