RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 CERKLQ49MI3 558 aaPredicted RBP16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 TATDN1Q6P1N9 297 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 UBE2Q1Q7Z7E8 422 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 CRNKL1Q9BZJ0 848 aaKnown RBP16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 EHD4Q9H223 541 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 TXNRD2Q9NNW7 524 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 CABP5Q9NP86 173 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 GJD2Q9UKL4 321 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 SALL3Q9BXA9 1300 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
SMARCC2-212ENST00000552566 TRIM32Q13049 653 aa16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 TMED8Q6PL24 325 aaPredicted RBP16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 EDC3Q96F86 508 aaKnown RBP16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 PAK6Q9NQU5 681 aaPredicted RBP16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 MCM9Q9NXL9 1143 aa16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 RBPJLQ9UBG7 517 aa16.69■□□□□ 0.26
SMARCC2-212ENST00000552566 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 Q3C1V9 767 aa16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 BMP2KLQ5H9B9 411 aa16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 HAUS7Q99871 368 aa16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 NUDT12Q9BQG2 462 aa16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 HMX1Q9NP08 348 aaPredicted RBP16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 NR2E3Q9Y5X4 410 aa16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 RBBP6Q7Z6E9 1792 aaKnown RBP16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 MAPK4P31152 587 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 SHMT1P34896 483 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP14P54578 494 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 ERVK-9P63128 1117 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 ERVK-24P63145 666 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 ACER1Q8TDN7 264 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 SDR42E1Q8WUS8 393 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 PAWRQ96IZ0 340 aaKnown RBP16.67■□□□□ 0.26
SMARCC2-212ENST00000552566 EVI5O60447 810 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 FXR1P51114 621 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 EVX2Q03828 476 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 WDR78Q5VTH9 848 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 LCORLQ8N3X6 602 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 GTF3C2Q8WUA4 911 aaPredicted RBP16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 SOCS4Q8WXH5 440 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 TRIB2Q92519 343 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 PORCNQ9H237 461 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
SMARCC2-212ENST00000552566 MAST2Q6P0Q8 1798 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 VCAM1P19320 739 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 SEPT2Q15019 361 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 GPR142Q7Z601 462 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 PLEKHH3Q7Z736 793 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 DIS3LQ8TF46 1054 aaKnown RBP16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 C12orf42Q96LP6 360 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 KIAA1683Q9H0B3 1180 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 CRISPLD2Q9H0B8 497 aa16.65■□□□□ 0.26
SMARCC2-212ENST00000552566 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 MBD4O95243 580 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 CYP2D6P10635 497 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 CAPN2P17655 700 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 POTEEQ6S8J3 1075 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 CATSPERGQ6ZRH7 1159 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■□□ 18.8
SMARCC2-212ENST00000552566 DCP1AQ9NPI6 582 aaPredicted RBP16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 RABGAP1Q9Y3P9 1069 aa16.64■□□□□ 0.25
SMARCC2-212ENST00000552566 HIP1O00291 1037 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 PRKAB2O43741 272 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 SDSP20132 328 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 GUCY1A2P33402 732 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 RGS2P41220 211 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 CCNA1P78396 465 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 CCL14Q16627 93 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 ZSCAN25Q6NSZ9 544 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
SMARCC2-212ENST00000552566 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms