RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 C8orf86Q6ZUL3 223 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 FERMT3Q86UX7 667 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 DDX42Q86XP3 938 aaKnown RBP eCLIP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 WFDC8Q8IUA0 241 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 KRTAP1-3Q8IUG1 177 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 CHAC2Q8WUX2 184 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 DHRS1Q96LJ7 313 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 SLC6A18Q96N87 628 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 CLUHP3Q96NS8 147 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 HOMER2Q9NSB8 354 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 G3BP2Q9UN86 482 aaKnown RBP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 THRAP3Q9Y2W1 955 aaKnown RBP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 MRPS23Q9Y3D9 190 aaKnown RBP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 IGF1RP08069 1367 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 ANKRD34BA5PLL1 514 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 FAM83GA6ND36 823 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 M0R082 166 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 IRS4O14654 1257 aaPredicted RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 TMPRSS2O15393 492 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 CAP2P40123 477 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 EVA1CP58658 441 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 NLRP12P59046 1061 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 FOXD4L6Q3SYB3 417 aaPredicted RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 HP1BP3Q5SSJ5 553 aaPredicted RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 YOD1Q5VVQ6 348 aaPredicted RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 FOXD4L3Q6VB84 417 aaPredicted RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 HID1Q8IV36 788 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 MAP4K3Q8IVH8 894 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 FAM13CQ8NE31 585 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 ZNF417Q8TAU3 575 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 PSMG3-AS1Q96PY0 264 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 ZNF587Q96SQ5 575 aaPredicted RBP5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 RUSC1Q9BVN2 902 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 KLHL25Q9H0H3 589 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 FBRSQ9HAH7 460 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 DISC1Q9NRI5 854 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 KCNK4Q9NYG8 393 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 CRIM1Q9NZV1 1036 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 PPP1R9AQ9ULJ8 1098 aa5.62□□□□□ -1.51
LSM6P2-201ENST00000552208 C9IYK1 514 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 PDE8AO60658 829 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 DEAF1O75398 565 aaPredicted RBP5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 RAPGEF3O95398 923 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 EPHX1P07099 455 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 PMLP29590 882 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 ID3Q02535 119 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 NKG7Q16617 165 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 BRDTQ58F21 947 aaPredicted RBP5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 AKAP4Q5JQC9 854 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 RNFT1Q5M7Z0 435 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 EXOSC6Q5RKV6 272 aaKnown RBP5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 SCUBE1Q8IWY4 988 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 AFAP1L2Q8N4X5 818 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 RNF214Q8ND24 703 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 ZNF507Q8TCN5 953 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 APBA2Q99767 749 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 HAUS7Q99871 368 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 USP26Q9BXU7 913 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 MRPL4Q9BYD3 311 aaKnown RBP5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 MAPRE3Q9UPY8 281 aa5.61□□□□□ -1.51
LSM6P2-201ENST00000552208 COL17A1Q9UMD9 1497 aaPredicted RBP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 TRBV23-1A0A0A0MS06 115 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 AGRPO00253 132 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 ITGAVP06756 1048 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 FGFR1P11362 822 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 NID1P14543 1247 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 SDSP20132 328 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 CD68P34810 354 aaPredicted RBP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 SOX5P35711 763 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 PPP2R2AP63151 447 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 SLBPQ14493 270 aaKnown RBP eCLIP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 HSP90AA2PQ14568 343 aaPredicted RBP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 SV2CQ496J9 727 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 ANKRD39Q53RE8 183 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 TRIM61Q5EBN2 209 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 AXDND1Q5T1B0 1012 aaPredicted RBP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 TMEM151AQ8N4L1 468 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 JDP2Q8WYK2 163 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 IRF7Q92985 503 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 OSBP2Q969R2 916 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 ACDQ96AP0 544 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 CCDC74BQ96LY2 380 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 FANCD2OSQ96PS1 177 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 TMPRSS13Q9BYE2 586 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 GSX1Q9H4S2 264 aaPredicted RBP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 LRRC4BQ9NT99 713 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 INTS7Q9NVH2 962 aaKnown RBP5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 APEX2Q9UBZ4 518 aa5.6□□□□□ -1.51
LSM6P2-201ENST00000552208 DNAJC25-GNG10A0A024R161 153 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 MEGF11A6BM72 1044 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 ALG1L2C9J202 215 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 EYA4O95677 639 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 CST3P01034 146 aaPredicted RBP5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 NEFMP07197 916 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 NAT2P11245 290 aa5.59□□□□□ -1.51
LSM6P2-201ENST00000552208 CNGA1P29973 690 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms