RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 ARHGAP39Q9C0H5 1083 aa23.2■■□□□ 1.3
GPN3-210ENST00000552180 EFCC1Q9HA90 598 aa23.2■■□□□ 1.3
GPN3-210ENST00000552180 TMOD4Q9NZQ9 345 aa23.2■■□□□ 1.3
GPN3-210ENST00000552180 CENPFP49454 3210 aa23.2■■□□□ 1.3
GPN3-210ENST00000552180 A0A1W2PRG0 241 aa23.19■■□□□ 1.3
GPN3-210ENST00000552180 MPHOSPH10O00566 681 aaKnown RBP23.19■■□□□ 1.3
GPN3-210ENST00000552180 SDSP20132 328 aa23.19■■□□□ 1.3
GPN3-210ENST00000552180 CTGFP29279 349 aa23.19■■□□□ 1.3
GPN3-210ENST00000552180 NMIQ13287 307 aaPredicted RBP23.19■■□□□ 1.3
GPN3-210ENST00000552180 PABPC4Q13310 644 aaKnown RBP eCLIP23.19■■□□□ 1.3
GPN3-210ENST00000552180 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
GPN3-210ENST00000552180 VPS53Q5VIR6 699 aa23.19■■□□□ 1.3
GPN3-210ENST00000552180 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
GPN3-210ENST00000552180 NACAP1Q9BZK3 213 aa23.19■■□□□ 1.3
GPN3-210ENST00000552180 ASCC2Q9H1I8 757 aaPredicted RBP23.19■■□□□ 1.3
GPN3-210ENST00000552180 MYH8P13535 1937 aa23.18■■□□□ 1.3
GPN3-210ENST00000552180 RASA1P20936 1047 aa23.18■■□□□ 1.3
GPN3-210ENST00000552180 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.18■■□□□ 1.3
GPN3-210ENST00000552180 PNMA3Q9UL41 463 aa23.18■■□□□ 1.3
GPN3-210ENST00000552180 USP14P54578 494 aa23.17■■□□□ 1.3
GPN3-210ENST00000552180 HPS5Q9UPZ3 1129 aa23.17■■□□□ 1.3
GPN3-210ENST00000552180 PTPN22Q9Y2R2 807 aa23.17■■□□□ 1.3
GPN3-210ENST00000552180 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
GPN3-210ENST00000552180 CAPN15O75808 1086 aa23.16■■□□□ 1.3
GPN3-210ENST00000552180 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
GPN3-210ENST00000552180 OSBPP22059 807 aa23.16■■□□□ 1.3
GPN3-210ENST00000552180 ALX1Q15699 326 aa23.16■■□□□ 1.3
GPN3-210ENST00000552180 ZYXQ15942 572 aaKnown RBP23.16■■□□□ 1.3
GPN3-210ENST00000552180 ZNF589Q86UQ0 364 aaPredicted RBP23.16■■□□□ 1.3
GPN3-210ENST00000552180 SMCR8Q8TEV9 937 aaPredicted RBP23.16■■□□□ 1.3
GPN3-210ENST00000552180 P2RX7Q99572 595 aaKnown RBP23.16■■□□□ 1.3
GPN3-210ENST00000552180 NAPBQ9H115 298 aa23.16■■□□□ 1.3
GPN3-210ENST00000552180 ARHGEF6Q15052 776 aa23.15■■□□□ 1.3
GPN3-210ENST00000552180 TTC22Q5TAA0 569 aa23.15■■□□□ 1.3
GPN3-210ENST00000552180 CLEC10AQ8IUN9 316 aa23.15■■□□□ 1.3
GPN3-210ENST00000552180 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
GPN3-210ENST00000552180 TRIM47Q96LD4 638 aa23.15■■□□□ 1.3
GPN3-210ENST00000552180 FEZ1Q99689 392 aa23.15■■□□□ 1.3
GPN3-210ENST00000552180 PSMC4P43686 418 aa23.14■■□□□ 1.29
GPN3-210ENST00000552180 GCLCP48506 637 aaPredicted RBP23.14■■□□□ 1.29
GPN3-210ENST00000552180 PPARAQ07869 468 aa23.14■■□□□ 1.29
GPN3-210ENST00000552180 KIF22Q14807 665 aa23.14■■□□□ 1.29
GPN3-210ENST00000552180 POTEEQ6S8J3 1075 aa23.14■■□□□ 1.29
GPN3-210ENST00000552180 MKNK2Q9HBH9 465 aa23.14■■□□□ 1.29
GPN3-210ENST00000552180 TMX2Q9Y320 296 aa23.14■■□□□ 1.29
GPN3-210ENST00000552180 CCDC85CA6NKD9 419 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 GNRH1P01148 92 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 HSPD1P10809 573 aaKnown RBP23.13■■□□□ 1.29
GPN3-210ENST00000552180 VCAM1P19320 739 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 ICA1Q05084 483 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 KIAA1755Q5JYT7 1200 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 ANKRD13CQ8N6S4 541 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 KANSL2Q9H9L4 492 aa23.13■■□□□ 1.29
GPN3-210ENST00000552180 GREB1LQ9C091 1923 aaPredicted RBP23.13■■□□□ 1.29
GPN3-210ENST00000552180 CCDC171Q6TFL3 1326 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L15C9J2P7 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L13C9JLJ4 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L11C9JVI0 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L18D6R9N7 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L22D6RA61 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L17D6RBQ6 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L19D6RCP7 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L20D6RJB6 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 FGAP02671 866 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 HERVK_113P62684 666 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 IRX3P78415 501 aaPredicted RBP23.12■■□□□ 1.29
GPN3-210ENST00000552180 USP17L24Q0WX57 530 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 FAM110CQ1W6H9 321 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 CATSPERGQ6ZRH7 1159 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 MORF4L1Q9UBU8 362 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 ANAPC4Q9UJX5 808 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 TACC3Q9Y6A5 838 aa23.12■■□□□ 1.29
GPN3-210ENST00000552180 IGKV6D-41A0A0C4DH26 115 aa23.11■■□□□ 1.29
GPN3-210ENST00000552180 PRDM1O75626 825 aa23.11■■□□□ 1.29
GPN3-210ENST00000552180 EEF2P13639 858 aaKnown RBP23.11■■□□□ 1.29
GPN3-210ENST00000552180 ZNF287Q9HBT7 754 aa23.11■■□□□ 1.29
GPN3-210ENST00000552180 RBPJLQ9UBG7 517 aa23.11■■□□□ 1.29
GPN3-210ENST00000552180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.11■■□□□ 1.29
GPN3-210ENST00000552180 HIP1O00291 1037 aa23.1■■□□□ 1.29
GPN3-210ENST00000552180 ECM2O94769 699 aaPredicted RBP23.1■■□□□ 1.29
GPN3-210ENST00000552180 FMNL1O95466 1100 aaPredicted RBP23.1■■□□□ 1.29
GPN3-210ENST00000552180 CWC27Q6UX04 472 aaKnown RBP23.1■■□□□ 1.29
GPN3-210ENST00000552180 ZNF444Q8N0Y2 327 aaPredicted RBP23.1■■□□□ 1.29
GPN3-210ENST00000552180 ARHGEF10LQ9HCE6 1279 aa23.1■■□□□ 1.29
GPN3-210ENST00000552180 TXNRD2Q9NNW7 524 aa23.1■■□□□ 1.29
GPN3-210ENST00000552180 ZMYM6O95789 1325 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 CTDSPL2Q05D32 466 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 PDE4BQ07343 736 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 CENPQQ7L2Z9 268 aaPredicted RBP23.09■■□□□ 1.29
GPN3-210ENST00000552180 RPAP3Q9H6T3 665 aaPredicted RBP23.09■■□□□ 1.29
GPN3-210ENST00000552180 VCPKMTQ9H867 229 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 INCENPQ9NQS7 918 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 DIAPH3Q9NSV4 1193 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 SRRDQ9UH36 339 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 PTCH2Q9Y6C5 1203 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 MGAMO43451 1857 aa23.09■■□□□ 1.29
GPN3-210ENST00000552180 PEX10O60683 326 aa23.08■■□□□ 1.29
GPN3-210ENST00000552180 SLC3A2P08195 630 aaKnown RBP23.08■■□□□ 1.29
GPN3-210ENST00000552180 FGRP09769 529 aa23.08■■□□□ 1.29
GPN3-210ENST00000552180 MFAP1P55081 439 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms