RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CAVIN4Q5BKX8 364 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 IQCA1Q86XH1 822 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 TC2NQ8N9U0 490 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 PHF20Q9BVI0 1012 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 BCORQ6W2J9 1755 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 STRCQ7RTU9 1775 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 EVX2Q03828 476 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 TOGARAM2Q6ZUX3 1019 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 MNS1Q8NEH6 495 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 SYMPKQ92797 1274 aaKnown RBP14.86□□□□□ -0.03
CACNB3-219ENST00000551544 AATFQ9NY61 560 aaKnown RBP eCLIP14.86□□□□□ -0.03
CACNB3-219ENST00000551544 ZNF804BA4D1E1 1349 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 COL4A1P02462 1669 aa14.86□□□□□ -0.03
CACNB3-219ENST00000551544 PRPF3O43395 683 aaKnown RBP14.85□□□□□ -0.03
CACNB3-219ENST00000551544 FAM193AP78312 1265 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 FUT2Q10981 343 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 PPP2R5BQ15173 497 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 TERF2Q15554 542 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 FCHSD1Q86WN1 690 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 USP17L12C9JPN9 530 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 USP17L21D6R901 530 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
CACNB3-219ENST00000551544 UBXN4Q92575 508 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 STAMQ92783 540 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 PAGE5Q96GU1 130 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 CCDC34Q96HJ3 373 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 ZNF446Q9NWS9 450 aa14.85□□□□□ -0.03
CACNB3-219ENST00000551544 COL1A1P02452 1464 aaPredicted RBP14.85□□□□□ -0.03
CACNB3-219ENST00000551544 NMT2O60551 498 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 GNG11P61952 73 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 MARCH10Q8NA82 808 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 SPATA20Q8TB22 786 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 DESI2Q9BSY9 194 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 CARD6Q9BX69 1037 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 BRMS1Q9HCU9 246 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 ZNF652Q9Y2D9 606 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 BCL9LQ86UU0 1499 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 TEX33O43247 280 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 STX10O60499 249 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 CD44P16070 742 aaKnown RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 ERCC5P28715 1186 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 GTF2E1P29083 439 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 TROAPQ12815 778 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 UBE4AQ14139 1066 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 ZNF384Q8TF68 577 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 FAM84BQ96KN1 310 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 NOL10Q9BSC4 688 aaKnown RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 COL14A1Q05707 1796 aaKnown RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 H2AFXP16104 143 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 NR1I3Q14994 352 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 CPLX3Q8WVH0 158 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 WDR24Q96S15 920 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 BRIP1Q9BX63 1249 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 RBM28Q9NW13 759 aaKnown RBP14.84□□□□□ -0.03
CACNB3-219ENST00000551544 MINPP1Q9UNW1 487 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 PARP3Q9Y6F1 533 aa14.84□□□□□ -0.03
CACNB3-219ENST00000551544 CLCN6P51797 869 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 TTC38Q5R3I4 469 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 CELF1Q92879 486 aaKnown RBP14.83□□□□□ -0.04
CACNB3-219ENST00000551544 MYH2Q9UKX2 1941 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 SYNRGQ9UMZ2 1314 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 COBLO75128 1261 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 KLRK1P26718 216 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 CASQ1P31415 396 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 KCNQ4P56696 695 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 KARSQ15046 597 aaKnown RBP14.83□□□□□ -0.04
CACNB3-219ENST00000551544 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 SMIM5Q71RC9 77 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 CREBRFQ8IUR6 639 aa14.83□□□□□ -0.04
CACNB3-219ENST00000551544 BSDC1Q9NW68 430 aaPredicted RBP14.83□□□□□ -0.04
CACNB3-219ENST00000551544 CICQ96RK0 1608 aaPredicted RBP14.82□□□□□ -0.04
CACNB3-219ENST00000551544 KCNQ2O43526 872 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 PTGDRQ13258 359 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 MTF1Q14872 753 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 SPATA1Q5VX52 437 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
CACNB3-219ENST00000551544 FERMT2Q96AC1 680 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 MYH6P13533 1939 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 PLCH1Q4KWH8 1693 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
CACNB3-219ENST00000551544 A0A1B0GTH6 734 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 CALM1P0DP23 149 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 CALM2P0DP24 149 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 CALM3P0DP25 149 aa14.82□□□□□ -0.04
CACNB3-219ENST00000551544 SRBD1Q8N5C6 995 aaKnown RBP14.82□□□□□ -0.04
CACNB3-219ENST00000551544 BAZ2BQ9UIF8 2168 aaKnown RBP14.82□□□□□ -0.04
CACNB3-219ENST00000551544 MYH14Q7Z406 1995 aaKnown RBP14.82□□□□□ -0.04
CACNB3-219ENST00000551544 AKR1B15C9JRZ8 316 aaPredicted RBP14.81□□□□□ -0.04
CACNB3-219ENST00000551544 NLRP5P59047 1200 aa14.81□□□□□ -0.04
CACNB3-219ENST00000551544 DPYDQ12882 1025 aa14.81□□□□□ -0.04
CACNB3-219ENST00000551544 NPY5RQ15761 445 aa14.81□□□□□ -0.04
CACNB3-219ENST00000551544 PIK3AP1Q6ZUJ8 805 aa14.81□□□□□ -0.04
CACNB3-219ENST00000551544 SRRTQ9BXP5 876 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms