RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 ADAM30Q9UKF2 790 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-215ENST00000551391 CSADQ9Y600 493 aa5.63□□□□□ -1.51
SCAF11-215ENST00000551391 TMEM265A0A087WTH1 108 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
SCAF11-215ENST00000551391 NEFMP07197 916 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 CAP2P40123 477 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 SOX9P48436 509 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 TNNI2P48788 182 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 SEZ6Q53EL9 994 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 FBLN7Q53RD9 439 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 TMEM201Q5SNT2 666 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 ANGEL2Q5VTE6 544 aaKnown RBP5.62□□□□□ -1.51
SCAF11-215ENST00000551391 VPS37DQ86XT2 251 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 WFDC3Q8IUB2 231 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 ISL2Q96A47 359 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 GMLQ99445 158 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 MKNK2Q9HBH9 465 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 CAPN10Q9HC96 672 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 BRMS1Q9HCU9 246 aa5.62□□□□□ -1.51
SCAF11-215ENST00000551391 MBNL3Q9NUK0 354 aaKnown RBP5.62□□□□□ -1.51
SCAF11-215ENST00000551391 PRAMEF27A3QJZ7 478 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 CEACAM5P06731 702 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 HCLS1P14317 486 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-215ENST00000551391 ATF4P18848 351 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-215ENST00000551391 GRK4P32298 578 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 NAALADL2Q58DX5 795 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 LRRN4CLQ8ND94 238 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 FAM84AQ96KN4 292 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 PICK1Q9NRD5 415 aa5.61□□□□□ -1.51
SCAF11-215ENST00000551391 HTR3BO95264 441 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 PGRP06401 933 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 IMPDH2P12268 514 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 CD96P40200 585 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 ETF1P62495 437 aaKnown RBP5.6□□□□□ -1.51
SCAF11-215ENST00000551391 SLC6A19Q695T7 634 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 CDC37L1Q7L3B6 337 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 HID1Q8IV36 788 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 MRPL41Q8IXM3 137 aaKnown RBP5.6□□□□□ -1.51
SCAF11-215ENST00000551391 GINM1Q9NU53 330 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 FAM53CQ9NYF3 392 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 ADAMTS6Q9UKP5 1117 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 CORINQ9Y5Q5 1042 aa5.6□□□□□ -1.51
SCAF11-215ENST00000551391 LRRC10BA6NIK2 292 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 GRIN3BO60391 1043 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 LEFTY1O75610 366 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 PLCG1P19174 1290 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 MCM4P33991 863 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 RANGAP1P46060 587 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-215ENST00000551391 MLECQ14165 292 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 SLBPQ14493 270 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCAF11-215ENST00000551391 LRRFIP1Q32MZ4 808 aaKnown RBP5.59□□□□□ -1.51
SCAF11-215ENST00000551391 SLC23A3Q6PIS1 610 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 MCATQ8IVS2 390 aaKnown RBP5.59□□□□□ -1.51
SCAF11-215ENST00000551391 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCAF11-215ENST00000551391 RBBP8NLQ8NC74 664 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-215ENST00000551391 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 REV1Q9UBZ9 1251 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 STRIP2Q9ULQ0 834 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 ZNRF3Q9ULT6 936 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 EFR3BQ9Y2G0 817 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 PCDHB14Q9Y5E9 798 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 SNX11Q9Y5W9 270 aa5.59□□□□□ -1.51
SCAF11-215ENST00000551391 ITIH2P19823 946 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 OXCT1P55809 520 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 ARID5AQ03989 594 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 CLCQ05315 142 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 TOP6BLQ8N6T0 577 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 ACSF2Q96CM8 615 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-215ENST00000551391 TMEM87BQ96K49 555 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 FBRSQ9HAH7 460 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 TJP2Q9UDY2 1190 aa5.58□□□□□ -1.52
SCAF11-215ENST00000551391 MEIS3P2A8K0S8 358 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 LRIG2O94898 1065 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 CST3P01034 146 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-215ENST00000551391 NASPP49321 788 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-215ENST00000551391 KCNMB1Q16558 191 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 NKG7Q16617 165 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 GK5Q6ZS86 529 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 UBE3DQ7Z6J8 389 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 ZSWIM9Q86XI8 627 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 SLFN12Q8IYM2 578 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 MFSD2AQ8NA29 543 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 ASB11Q8WXH4 323 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 FOXQ1Q9C009 403 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 GTF2IRD1Q9UHL9 959 aa5.57□□□□□ -1.52
SCAF11-215ENST00000551391 SLC22A31A6NKX4 558 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 FGRP09769 529 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
SCAF11-215ENST00000551391 IKZF1Q13422 519 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 MLANAQ16655 118 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 CDCP2Q5VXM1 449 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 SPOCD1Q6ZMY3 1216 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 ARMCX6Q7L4S7 300 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 FLAD1Q8NFF5 587 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 BHLHE22Q8NFJ8 381 aaPredicted RBP5.56□□□□□ -1.52
SCAF11-215ENST00000551391 SRRTQ9BXP5 876 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms