RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 ARMCX5Q6P1M9 558 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 RIPOR1Q6ZS17 1223 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 TXNDC2Q86VQ3 553 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 DHX40Q8IX18 779 aaKnown RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 TEX11Q8IYF3 940 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 FAM71BQ8TC56 605 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 RHPN1Q8TCX5 695 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 MKL1Q969V6 931 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 MPHOSPH8Q99549 860 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 THUMPD2Q9BTF0 503 aaKnown RBP6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 PARD6BQ9BYG5 372 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 VIPAS39Q9H9C1 493 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 TERF2IPQ9NYB0 399 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 HCN2Q9UL51 889 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 BCS1LQ9Y276 419 aa6.1□□□□□ -1.43
LSM3P2-201ENST00000551246 AOX1Q06278 1338 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 NPHP3Q7Z494 1330 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 SCP2P22307 547 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 MTHFSP49914 203 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 PDE1AP54750 535 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 TUBB4BP68371 445 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 BIRC2Q13490 618 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 NEDD9Q14511 834 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 SLC5A9Q2M3M2 681 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 FAM26DQ5JW98 314 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 C16orf46Q6P387 395 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 CWC27Q6UX04 472 aaKnown RBP6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 RUFY3Q7L099 469 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 HDXQ7Z353 690 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 MORC1Q86VD1 984 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 NLRP8Q86W28 1048 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 FMNL3Q8IVF7 1028 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 MAB21L3Q8N8X9 362 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 ZNF280CQ8ND82 737 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 BICD2Q8TD16 824 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 DNAAF4Q8WXU2 420 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 ZNF775Q96BV0 537 aaPredicted RBP6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 GMCL1Q96IK5 515 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 HSH2DQ96JZ2 352 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 CFAP53Q96M91 514 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 PSMD1Q99460 953 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 BPIFA3Q9BQP9 254 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 CARD6Q9BX69 1037 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 API5Q9BZZ5 524 aaKnown RBP6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 NUCKS1Q9H1E3 243 aaKnown RBP6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 NDFIP2Q9NV92 336 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 MRFAP1Q9Y605 127 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 RPS6KL1Q9Y6S9 549 aa6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 ZC3H13Q5T200 1668 aaKnown RBP6.09□□□□□ -1.43
LSM3P2-201ENST00000551246 TRPM2O94759 1503 aa6.09□□□□□ -1.44
LSM3P2-201ENST00000551246 ARHGEF40Q8TER5 1519 aa6.09□□□□□ -1.44
LSM3P2-201ENST00000551246 NSD3Q9BZ95 1437 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 SOS1Q07889 1333 aaPredicted RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 H7C1W4 665 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 CHUKO15111 745 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 FIBPO43427 364 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 ERLIN2O94905 339 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 TUBBP07437 444 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 SCRN1Q12765 414 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 SAMD5Q5TGI4 173 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 CEP85Q6P2H3 762 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 CPLX2Q6PUV4 134 aaKnown RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 DRC7Q8IY82 874 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 CCDC26Q8TAB7 109 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 ZNF483Q8TF39 744 aaPredicted RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 ZKSCAN4Q969J2 545 aaPredicted RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 VTI1AQ96AJ9 217 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 PGBD1Q96JS3 809 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 SUSD3Q96L08 255 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 TM6SF1Q9BZW5 370 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 ALDH8A1Q9H2A2 487 aaPredicted RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 PDE11AQ9HCR9 933 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 TRMT1Q9NXH9 659 aaKnown RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 ETAA1Q9NY74 926 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 KLK14Q9P0G3 267 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 DMGDHQ9UI17 866 aaKnown RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 LIMCH1Q9UPQ0 1083 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 FAN1Q9Y2M0 1017 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 USP16Q9Y5T5 823 aa6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 DNMT3AQ9Y6K1 912 aaPredicted RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 NPHP4O75161 1426 aaPredicted RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 CPSF1Q10570 1443 aaKnown RBP6.08□□□□□ -1.44
LSM3P2-201ENST00000551246 ADAMTS12P58397 1594 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 CDC14CA4D256 554 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 RASSF9O75901 435 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 FAM163BP0C2L3 166 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 RWDD2BP57060 319 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 TRAF1Q13077 416 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 DGKZQ13574 1117 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 TUBB2AQ13885 445 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 RGL3Q3MIN7 710 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ARSJQ5FYB0 599 aaPredicted RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 EFHC2Q5JST6 749 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 GORABQ5T7V8 394 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 IER5Q5VY09 327 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 NAIF1Q69YI7 327 aaPredicted RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 TTLL5Q6EMB2 1281 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 BICDL1Q6ZP65 573 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms