RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 INCENPQ9NQS7 918 aa11.29□□□□□ -0.6
PFDN5-215ENST00000551223 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
PFDN5-215ENST00000551223 TACC3Q9Y6A5 838 aa11.29□□□□□ -0.6
PFDN5-215ENST00000551223 RAD50Q92878 1312 aa11.29□□□□□ -0.6
PFDN5-215ENST00000551223 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 SGSM2O43147 1006 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 HAND2P61296 217 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 PDE4BQ07343 736 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 TREML2Q5T2D2 321 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 ZNF444Q8N0Y2 327 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-215ENST00000551223 PROCA1Q8NCQ7 364 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-215ENST00000551223 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 ZFYVE28Q9HCC9 887 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 PRDM10Q9NQV6 1147 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
PFDN5-215ENST00000551223 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
PFDN5-215ENST00000551223 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 GPR25O00155 361 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 FGRP09769 529 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 USP17L2Q6R6M4 530 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 FEZ1Q99689 392 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 KANSL2Q9H9L4 492 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 AGTPBP1Q9UPW5 1226 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 SLC45A1Q9Y2W3 748 aa11.27□□□□□ -0.61
PFDN5-215ENST00000551223 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ZNF213O14771 459 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ORC4O43929 436 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 CYP2C8P10632 490 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 EEF2P13639 858 aaKnown RBP11.26□□□□□ -0.61
PFDN5-215ENST00000551223 TFAP4Q01664 338 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 PTH1RQ03431 593 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ICA1Q05084 483 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
PFDN5-215ENST00000551223 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
PFDN5-215ENST00000551223 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 TBC1D10CQ8IV04 446 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ZNF296Q8WUU4 475 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-215ENST00000551223 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ESYT1Q9BSJ8 1104 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 CTNNA3Q9UI47 895 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 TMX2Q9Y320 296 aa11.26□□□□□ -0.61
PFDN5-215ENST00000551223 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
PFDN5-215ENST00000551223 TLR2O60603 784 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 CDC45O75419 566 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 TSPY3P0CV98 308 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 TSPY8P0CW00 308 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 USP14P54578 494 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 ATP2B2Q01814 1243 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 AKNAD1Q5T1N1 836 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 COL13A1Q5TAT6 717 aaPredicted RBP11.25□□□□□ -0.61
PFDN5-215ENST00000551223 PARK7Q99497 189 aaKnown RBP11.25□□□□□ -0.61
PFDN5-215ENST00000551223 LOC285556D6RIA3 1793 aa11.25□□□□□ -0.61
PFDN5-215ENST00000551223 RANBP6O60518 1105 aaKnown RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 FKTNO75072 461 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 VCAM1P19320 739 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 OSBPP22059 807 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 HOXA7P31268 230 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.612e-12■■■■■ 29.6
PFDN5-215ENST00000551223 IMMTQ16891 758 aaKnown RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 RRP12Q5JTH9 1297 aaKnown RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 C17orf99Q6UX52 265 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 STAG1Q8WVM7 1258 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 MAP4K1Q92918 833 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 CEP95Q96GE4 821 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 SH2D4AQ9H788 454 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 CPA4Q9UI42 421 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
PFDN5-215ENST00000551223 ADGRA2Q96PE1 1338 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 PLIN4Q96Q06 1357 aa11.24□□□□□ -0.61
PFDN5-215ENST00000551223 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 SP3Q02447 781 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 MKL1Q969V6 931 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 P2RX7Q99572 595 aaKnown RBP11.23□□□□□ -0.61
PFDN5-215ENST00000551223 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
PFDN5-215ENST00000551223 VCPKMTQ9H867 229 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
PFDN5-215ENST00000551223 USP17L15C9J2P7 530 aa11.22□□□□□ -0.61
PFDN5-215ENST00000551223 USP17L13C9JLJ4 530 aa11.22□□□□□ -0.61
PFDN5-215ENST00000551223 USP17L11C9JVI0 530 aa11.22□□□□□ -0.61
PFDN5-215ENST00000551223 USP17L18D6R9N7 530 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms