RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 RBM47A0AV96 593 aaKnown RBP8.08□□□□□ -1.12
GPN3-209ENST00000551079 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 GREM1O60565 184 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
GPN3-209ENST00000551079 ITGB5P18084 799 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 ZP2Q05996 745 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 THAP5Q7Z6K1 395 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 DNAJB8Q8NHS0 232 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 PIWIL2Q8TC59 973 aaKnown RBP8.08□□□□□ -1.12
GPN3-209ENST00000551079 ZNF296Q8WUU4 475 aaPredicted RBP8.08□□□□□ -1.12
GPN3-209ENST00000551079 ASIC4Q96FT7 647 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 RC3H2Q9HBD1 1191 aaKnown RBP8.08□□□□□ -1.12
GPN3-209ENST00000551079 SEMA3GQ9NS98 782 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 MBNL3Q9NUK0 354 aaKnown RBP8.08□□□□□ -1.12
GPN3-209ENST00000551079 LMCD1Q9NZU5 365 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 ADAMTS6Q9UKP5 1117 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 ST14Q9Y5Y6 855 aa8.08□□□□□ -1.12
GPN3-209ENST00000551079 H3BS24 57 aa8.07□□□□□ -1.12
GPN3-209ENST00000551079 TLR3O15455 904 aaKnown RBP8.07□□□□□ -1.12
GPN3-209ENST00000551079 KLHL3Q9UH77 587 aa8.07□□□□□ -1.12
GPN3-209ENST00000551079 RNF114Q9Y508 228 aa8.07□□□□□ -1.12
GPN3-209ENST00000551079 TNK2Q07912 1038 aa8.06□□□□□ -1.12
GPN3-209ENST00000551079 ATG4DQ86TL0 474 aaPredicted RBP8.06□□□□□ -1.12
GPN3-209ENST00000551079 PPP1R13LQ8WUF5 828 aa8.06□□□□□ -1.12
GPN3-209ENST00000551079 CCDC74BQ96LY2 380 aa8.06□□□□□ -1.12
GPN3-209ENST00000551079 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
GPN3-209ENST00000551079 BACH2Q9BYV9 841 aa8.06□□□□□ -1.12
GPN3-209ENST00000551079 ATP13A1Q9HD20 1204 aa8.06□□□□□ -1.12
GPN3-209ENST00000551079 ZNF76P36508 570 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 TXKP42681 527 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 TNNI2P48788 182 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 LDLRAD1Q5T700 205 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 LRRN4CLQ8ND94 238 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 METTL5Q9NRN9 209 aaKnown RBP8.05□□□□□ -1.12
GPN3-209ENST00000551079 ADAMTS1Q9UHI8 967 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 PCDHB14Q9Y5E9 798 aa8.05□□□□□ -1.12
GPN3-209ENST00000551079 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 ATE1O95260 518 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 PHACTR4Q8IZ21 702 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 UBE2FQ969M7 185 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 CARS2Q9HA77 564 aaKnown RBP8.04□□□□□ -1.12
GPN3-209ENST00000551079 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 ZSWIM5Q9P217 1185 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 KCNH3Q9ULD8 1083 aa8.04□□□□□ -1.12
GPN3-209ENST00000551079 PAPLNO95428 1278 aa8.03□□□□□ -1.12
GPN3-209ENST00000551079 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
GPN3-209ENST00000551079 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
GPN3-209ENST00000551079 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
GPN3-209ENST00000551079 Q96M66 194 aa8.03□□□□□ -1.12
GPN3-209ENST00000551079 NT5C1AQ9BXI3 368 aa8.03□□□□□ -1.12
GPN3-209ENST00000551079 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
GPN3-209ENST00000551079 DNAJA2O60884 412 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 CRKP46108 304 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 TMPRSS7Q7RTY8 843 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 KIAA0825Q8IV33 1275 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 REXO1Q8N1G1 1221 aaKnown RBP8.02□□□□□ -1.13
GPN3-209ENST00000551079 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
GPN3-209ENST00000551079 EHMT1Q9H9B1 1298 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 UBP1Q9NZI7 540 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 GMIPQ9P107 970 aa8.02□□□□□ -1.13
GPN3-209ENST00000551079 SLC22A31A6NKX4 558 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 VAMP1P23763 118 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 GBP1P32455 592 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 FANCCQ00597 558 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 SEZ6Q53EL9 994 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 DTWD2Q8NBA8 298 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 FLAD1Q8NFF5 587 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 CCDC120Q96HB5 630 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 KREMEN1Q96MU8 473 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 SPON2Q9BUD6 331 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 ASPNQ9BXN1 380 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 GPR62Q9BZJ7 368 aa8.01□□□□□ -1.13
GPN3-209ENST00000551079 RGS13O14921 159 aa8□□□□□ -1.13
GPN3-209ENST00000551079 RAG1P15918 1043 aa8□□□□□ -1.13
GPN3-209ENST00000551079 MCM4P33991 863 aa8□□□□□ -1.13
GPN3-209ENST00000551079 ZNF165P49910 485 aa8□□□□□ -1.13
GPN3-209ENST00000551079 USP48Q86UV5 1035 aa8□□□□□ -1.13
GPN3-209ENST00000551079 SLITRK4Q8IW52 837 aa8□□□□□ -1.13
GPN3-209ENST00000551079 NKD1Q969G9 470 aa8□□□□□ -1.13
GPN3-209ENST00000551079 RNF34Q969K3 372 aa8□□□□□ -1.13
GPN3-209ENST00000551079 KIF2CQ99661 725 aa8□□□□□ -1.13
GPN3-209ENST00000551079 DUSP15Q9H1R2 295 aaPredicted RBP8□□□□□ -1.13
GPN3-209ENST00000551079 GPATCH2Q9NW75 528 aa8□□□□□ -1.13
GPN3-209ENST00000551079 TPP2P29144 1249 aaPredicted RBP7.99□□□□□ -1.13
GPN3-209ENST00000551079 ARSHQ5FYA8 562 aa7.99□□□□□ -1.13
GPN3-209ENST00000551079 GK5Q6ZS86 529 aa7.99□□□□□ -1.13
GPN3-209ENST00000551079 SRFP11831 508 aa7.98□□□□□ -1.13
GPN3-209ENST00000551079 LRRFIP1Q32MZ4 808 aaKnown RBP7.98□□□□□ -1.13
GPN3-209ENST00000551079 CDCP2Q5VXM1 449 aa7.98□□□□□ -1.13
GPN3-209ENST00000551079 FAM168AQ92567 244 aa7.98□□□□□ -1.13
GPN3-209ENST00000551079 EAF1Q96JC9 268 aaPredicted RBP7.98□□□□□ -1.13
GPN3-209ENST00000551079 ALPK1Q96QP1 1244 aa7.98□□□□□ -1.13
GPN3-209ENST00000551079 CTNND2Q9UQB3 1225 aa7.98□□□□□ -1.13
GPN3-209ENST00000551079 RBAK-RBAKDNI3L0D1 243 aa7.97□□□□□ -1.13
GPN3-209ENST00000551079 SCAMP3O14828 347 aaKnown RBP7.97□□□□□ -1.13
GPN3-209ENST00000551079 RECKO95980 971 aa7.97□□□□□ -1.13
GPN3-209ENST00000551079 AFMP43652 599 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms