RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 GK5Q6ZS86 529 aa8.77□□□□□ -1.01
LETMD1-226ENST00000550755 ZNF654Q8IZM8 581 aa8.77□□□□□ -1.01
LETMD1-226ENST00000550755 REXO1Q8N1G1 1221 aaKnown RBP8.77□□□□□ -1.01
LETMD1-226ENST00000550755 CCDC74BQ96LY2 380 aa8.77□□□□□ -1.01
LETMD1-226ENST00000550755 PAK6Q9NQU5 681 aaPredicted RBP8.77□□□□□ -1.01
LETMD1-226ENST00000550755 CHURC1-FNTBB4DL54 471 aa8.76□□□□□ -1.01
LETMD1-226ENST00000550755 ATE1O95260 518 aa8.76□□□□□ -1.01
LETMD1-226ENST00000550755 ANGEL2Q5VTE6 544 aaKnown RBP8.76□□□□□ -1.01
LETMD1-226ENST00000550755 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
LETMD1-226ENST00000550755 SPRED2Q7Z698 418 aa8.76□□□□□ -1.01
LETMD1-226ENST00000550755 ABI1Q8IZP0 508 aa8.76□□□□□ -1.01
LETMD1-226ENST00000550755 KIAA1522Q9P206 1035 aaPredicted RBP8.76□□□□□ -1.01
LETMD1-226ENST00000550755 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
LETMD1-226ENST00000550755 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 PRR33A8MZF0 331 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 CD8BP10966 210 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 RAG1P15918 1043 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 GBP1P32455 592 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 LRRFIP1Q32MZ4 808 aaKnown RBP8.75□□□□□ -1.01
LETMD1-226ENST00000550755 ZNF574Q6ZN55 896 aaPredicted RBP8.75□□□□□ -1.01
LETMD1-226ENST00000550755 SLITRK4Q8IW52 837 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 DNAJB8Q8NHS0 232 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 EAF1Q96JC9 268 aaPredicted RBP8.75□□□□□ -1.01
LETMD1-226ENST00000550755 EHMT1Q9H9B1 1298 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 PODXL2Q9NZ53 605 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 GMIPQ9P107 970 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 CAPN6Q9Y6Q1 641 aa8.75□□□□□ -1.01
LETMD1-226ENST00000550755 IKZF1Q13422 519 aa8.74□□□□□ -1.01
LETMD1-226ENST00000550755 PIWIL2Q8TC59 973 aaKnown RBP8.74□□□□□ -1.01
LETMD1-226ENST00000550755 HSPA12BQ96MM6 686 aa8.74□□□□□ -1.01
LETMD1-226ENST00000550755 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
LETMD1-226ENST00000550755 CNTNAP4Q9C0A0 1308 aa8.74□□□□□ -1.01
LETMD1-226ENST00000550755 SLC22A31A6NKX4 558 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 CLCQ05315 142 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 ARSHQ5FYA8 562 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 NFXL1Q6ZNB6 911 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 NT5DC4Q86YG4 428 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 PI4K2BQ8TCG2 481 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 KIF2CQ99661 725 aa8.73□□□□□ -1.01
LETMD1-226ENST00000550755 H3BS24 57 aa8.72□□□□□ -1.01
LETMD1-226ENST00000550755 CD96P40200 585 aa8.72□□□□□ -1.01
LETMD1-226ENST00000550755 RACK1P63244 317 aaKnown RBP8.72□□□□□ -1.01
LETMD1-226ENST00000550755 HDLBPQ00341 1268 aaKnown RBP8.72□□□□□ -1.01
LETMD1-226ENST00000550755 BAHD1Q8TBE0 780 aaPredicted RBP8.72□□□□□ -1.01
LETMD1-226ENST00000550755 PPP1R13LQ8WUF5 828 aa8.72□□□□□ -1.01
LETMD1-226ENST00000550755 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
LETMD1-226ENST00000550755 PITPNM2Q9BZ72 1349 aa8.72□□□□□ -1.01
LETMD1-226ENST00000550755 RGS13O14921 159 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 DNAJA2O60884 412 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 IMPDH2P12268 514 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 FUT4P22083 530 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 TNK2Q07912 1038 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 C9orf131Q5VYM1 1079 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 OVOS1Q6IE37 1185 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 THAP5Q7Z6K1 395 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 METTL16Q86W50 562 aaKnown RBP8.71□□□□□ -1.02
LETMD1-226ENST00000550755 SPATA32Q96LK8 384 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 FERD3LQ96RJ6 166 aa8.71□□□□□ -1.02
LETMD1-226ENST00000550755 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
LETMD1-226ENST00000550755 RANGAP1P46060 587 aaPredicted RBP8.7□□□□□ -1.02
LETMD1-226ENST00000550755 ZP2Q05996 745 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 NLRC3Q7RTR2 1065 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 KREMEN1Q96MU8 473 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 ASPNQ9BXN1 380 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.7□□□□□ -1.02
LETMD1-226ENST00000550755 TRIT1Q9H3H1 467 aaKnown RBP8.7□□□□□ -1.02
LETMD1-226ENST00000550755 ZSWIM5Q9P217 1185 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 ADGRE2Q9UHX3 823 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 ST14Q9Y5Y6 855 aa8.7□□□□□ -1.02
LETMD1-226ENST00000550755 RNF4P78317 190 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 PAK2Q13177 524 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 CDCP2Q5VXM1 449 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 FBXW10Q5XX13 1052 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 TMEM40Q8WWA1 233 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 UBE2FQ969M7 185 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 CNNM2Q9H8M5 875 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 GPATCH2Q9NW75 528 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 LMCD1Q9NZU5 365 aa8.69□□□□□ -1.02
LETMD1-226ENST00000550755 RAD51AP2Q09MP3 1159 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 COL9A2Q14055 689 aaPredicted RBP8.68□□□□□ -1.02
LETMD1-226ENST00000550755 ZNF792Q3KQV3 632 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 MCTP1Q6DN14 999 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 SLC23A3Q6PIS1 610 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 WFDC3Q8IUB2 231 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 ASCC2Q9H1I8 757 aaPredicted RBP8.68□□□□□ -1.02
LETMD1-226ENST00000550755 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
LETMD1-226ENST00000550755 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
LETMD1-226ENST00000550755 CCNFP41002 786 aa8.67□□□□□ -1.02
LETMD1-226ENST00000550755 RBM25P49756 843 aaKnown RBP8.67□□□□□ -1.02
LETMD1-226ENST00000550755 DTWD2Q8NBA8 298 aa8.67□□□□□ -1.02
LETMD1-226ENST00000550755 Q96M66 194 aa8.67□□□□□ -1.02
LETMD1-226ENST00000550755 ZNRF3Q9ULT6 936 aa8.67□□□□□ -1.02
LETMD1-226ENST00000550755 COL17A1Q9UMD9 1497 aaPredicted RBP8.67□□□□□ -1.02
LETMD1-226ENST00000550755 BIN1O00499 593 aa8.66□□□□□ -1.02
LETMD1-226ENST00000550755 TMPRSS7Q7RTY8 843 aa8.66□□□□□ -1.02
LETMD1-226ENST00000550755 GPRASP2Q96D09 838 aa8.66□□□□□ -1.02
LETMD1-226ENST00000550755 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
LETMD1-226ENST00000550755 TGIF2Q9GZN2 237 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms