RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 RAB3GAP1Q15042 981 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-210ENST00000550513 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
PFDN5-210ENST00000550513 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 MAP3K21Q5TCX8 1036 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 GPR142Q7Z601 462 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 TRMT44Q8IYL2 757 aaKnown RBP13.19□□□□□ -0.3
PFDN5-210ENST00000550513 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 APBA2Q99767 749 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 PORCNQ9H237 461 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 RBPJLQ9UBG7 517 aa13.19□□□□□ -0.3
PFDN5-210ENST00000550513 MAGEB6P1A0A0J9YX57 407 aa13.18□□□□□ -0.3
PFDN5-210ENST00000550513 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
PFDN5-210ENST00000550513 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
PFDN5-210ENST00000550513 RIOK1Q9BRS2 568 aaKnown RBP13.18□□□□□ -0.3
PFDN5-210ENST00000550513 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
PFDN5-210ENST00000550513 C11orf49Q9H6J7 331 aa13.18□□□□□ -0.3
PFDN5-210ENST00000550513 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L15C9J2P7 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L13C9JLJ4 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L11C9JVI0 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L18D6R9N7 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L22D6RA61 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L17D6RBQ6 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L19D6RCP7 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L20D6RJB6 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 VCAM1P19320 739 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 SHMT1P34896 483 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 CCNA1P78396 465 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 USP17L24Q0WX57 530 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 MIER1Q8N108 512 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
PFDN5-210ENST00000550513 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 CABP5Q9NP86 173 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 OGDHLQ9ULD0 1010 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 RABGAP1Q9Y3P9 1069 aa13.17□□□□□ -0.3
PFDN5-210ENST00000550513 APBB1O00213 710 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 POLR3DP05423 398 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-210ENST00000550513 MS4A1P11836 297 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 PDE6AP16499 860 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 MNX1P50219 401 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-210ENST00000550513 PLCD1P51178 756 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 CACNB2Q08289 660 aaPredicted RBP13.16□□□□□ -0.3
PFDN5-210ENST00000550513 CCL14Q16627 93 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 Q3C1V9 767 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 MORN1Q5T089 497 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 SLC9C2Q5TAH2 1124 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 POTEEQ6S8J3 1075 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
PFDN5-210ENST00000550513 USP6NLQ92738 828 aa13.16□□□□□ -0.3
PFDN5-210ENST00000550513 DNAJC2Q99543 621 aaKnown RBP13.16□□□□□ -0.3
PFDN5-210ENST00000550513 PFASO15067 1338 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 ZNF532Q9HCE3 1301 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 GOLIM4O00461 696 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 HMMRO75330 724 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 CNMDO75829 334 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
PFDN5-210ENST00000550513 IFIT2P09913 472 aaKnown RBP13.15□□□□□ -0.3
PFDN5-210ENST00000550513 CCND3P30281 292 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-210ENST00000550513 MAP2K5Q13163 448 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
PFDN5-210ENST00000550513 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 RPAP3Q9H6T3 665 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-210ENST00000550513 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
PFDN5-210ENST00000550513 ZMYND8Q9ULU4 1186 aaPredicted RBP13.15□□□□□ -0.3
PFDN5-210ENST00000550513 DNAH12Q6ZR08 3092 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
PFDN5-210ENST00000550513 MPHOSPH10O00566 681 aaKnown RBP13.14□□□□□ -0.31
PFDN5-210ENST00000550513 GABPAQ06546 454 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 SEPT2Q15019 361 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
PFDN5-210ENST00000550513 LCORLQ8N3X6 602 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 IVNS1ABPQ9Y6Y0 642 aa13.14□□□□□ -0.31
PFDN5-210ENST00000550513 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 SOX1O00570 391 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-210ENST00000550513 SYN1P17600 705 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 GUCY1A2P33402 732 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 EVX2Q03828 476 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-210ENST00000550513 GDF15Q99988 308 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-210ENST00000550513 BTBD7Q9P203 1132 aa13.13□□□□□ -0.31
PFDN5-210ENST00000550513 SLC15A5A6NIM6 579 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 COL6A1P12109 1028 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 PTPREP23469 700 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 BMP8BP34820 402 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 GRB14Q14449 540 aa13.12□□□□□ -0.31
PFDN5-210ENST00000550513 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms