RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 GTF3C2Q8WUA4 911 aaPredicted RBP23■■□□□ 1.27
LETMD1-224ENST00000550446 DNAJC2Q99543 621 aaKnown RBP23■■□□□ 1.27
LETMD1-224ENST00000550446 CWC22Q9HCG8 908 aaKnown RBP23■■□□□ 1.27
LETMD1-224ENST00000550446 COG6Q9Y2V7 657 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 GOLIM4O00461 696 aa22.99■■□□□ 1.27
LETMD1-224ENST00000550446 XRCC5P13010 732 aaKnown RBP22.99■■□□□ 1.27
LETMD1-224ENST00000550446 PDE6AP16499 860 aa22.99■■□□□ 1.27
LETMD1-224ENST00000550446 PLEKHH3Q7Z736 793 aa22.99■■□□□ 1.27
LETMD1-224ENST00000550446 SOCS4Q8WXH5 440 aa22.99■■□□□ 1.27
LETMD1-224ENST00000550446 KIF1BPQ96EK5 621 aa22.99■■□□□ 1.27
LETMD1-224ENST00000550446 HMMRO75330 724 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 PRKAR2AP13861 404 aaKnown RBP22.98■■□□□ 1.27
LETMD1-224ENST00000550446 SHMT1P34896 483 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 USP14P54578 494 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 GPR142Q7Z601 462 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 SIRT2Q8IXJ6 389 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 ANKLE1Q8NAG6 615 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 C12orf42Q96LP6 360 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 CRNKL1Q9BZJ0 848 aaKnown RBP22.98■■□□□ 1.27
LETMD1-224ENST00000550446 MCM9Q9NXL9 1143 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 ZNF532Q9HCE3 1301 aa22.98■■□□□ 1.27
LETMD1-224ENST00000550446 CATSPERGQ6ZRH7 1159 aa22.97■■□□□ 1.27
LETMD1-224ENST00000550446 NBPF3Q9H094 633 aa22.97■■□□□ 1.27
LETMD1-224ENST00000550446 KIAA1683Q9H0B3 1180 aa22.97■■□□□ 1.27
LETMD1-224ENST00000550446 ZBTB40Q9NUA8 1239 aa22.97■■□□□ 1.27
LETMD1-224ENST00000550446 DDX19BQ9UMR2 479 aa22.97■■□□□ 1.27
LETMD1-224ENST00000550446 RABGAP1Q9Y3P9 1069 aa22.97■■□□□ 1.27
LETMD1-224ENST00000550446 SZT2Q5T011 3432 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 MPHOSPH10O00566 681 aaKnown RBP22.96■■□□□ 1.27
LETMD1-224ENST00000550446 ZKSCAN1P17029 563 aaPredicted RBP22.96■■□□□ 1.27
LETMD1-224ENST00000550446 RGS2P41220 211 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 EVX2Q03828 476 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 CCL14Q16627 93 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 MORN1Q5T089 497 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 WDR78Q5VTH9 848 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 TRMT44Q8IYL2 757 aaKnown RBP22.96■■□□□ 1.27
LETMD1-224ENST00000550446 USP6NLQ92738 828 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 EDC3Q96F86 508 aaKnown RBP22.96■■□□□ 1.27
LETMD1-224ENST00000550446 PRO3102Q9H379 93 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 STAP2Q9UGK3 403 aa22.96■■□□□ 1.27
LETMD1-224ENST00000550446 CNMDO75829 334 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 VCAM1P19320 739 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 GUCY1A2P33402 732 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 CACNB2Q08289 660 aaPredicted RBP22.95■■□□□ 1.26
LETMD1-224ENST00000550446 SEPT2Q15019 361 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 MAP3K21Q5TCX8 1036 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 SDR42E1Q8WUS8 393 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 CDK5RAP2Q96SN8 1893 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 OGDHLQ9ULD0 1010 aa22.95■■□□□ 1.26
LETMD1-224ENST00000550446 TCRBV5S4A2TA0A5A2 114 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 RAB11FIP3O75154 756 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 MNX1P50219 401 aaPredicted RBP22.94■■□□□ 1.26
LETMD1-224ENST00000550446 CCNA1P78396 465 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 C7orf61Q8IZ16 206 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 LCORLQ8N3X6 602 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.94■■□□□ 1.26
LETMD1-224ENST00000550446 BOLA2Q9H3K6 86 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 C11orf49Q9H6J7 331 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 RPAP3Q9H6T3 665 aaPredicted RBP22.94■■□□□ 1.26
LETMD1-224ENST00000550446 FOCADQ5VW36 1801 aa22.94■■□□□ 1.26
LETMD1-224ENST00000550446 GLRX3O76003 335 aaKnown RBP22.93■■□□□ 1.26
LETMD1-224ENST00000550446 CYP2D6P10635 497 aa22.93■■□□□ 1.26
LETMD1-224ENST00000550446 GABPAQ06546 454 aa22.93■■□□□ 1.26
LETMD1-224ENST00000550446 SLFNL1Q499Z3 407 aa22.93■■□□□ 1.26
LETMD1-224ENST00000550446 ARMT1Q9H993 441 aa22.93■■□□□ 1.26
LETMD1-224ENST00000550446 CCND3P30281 292 aaPredicted RBP22.92■■□□□ 1.26
LETMD1-224ENST00000550446 MAP2K5Q13163 448 aa22.92■■□□□ 1.26
LETMD1-224ENST00000550446 DCP1AQ9NPI6 582 aaPredicted RBP22.92■■□□□ 1.26
LETMD1-224ENST00000550446 BTBD7Q9P203 1132 aa22.92■■□□□ 1.26
LETMD1-224ENST00000550446 MYH1P12882 1939 aa22.92■■□□□ 1.26
LETMD1-224ENST00000550446 PRKAB2O43741 272 aa22.91■■□□□ 1.26
LETMD1-224ENST00000550446 APBA2Q99767 749 aa22.91■■□□□ 1.26
LETMD1-224ENST00000550446 PAG1Q9NWQ8 432 aa22.91■■□□□ 1.26
LETMD1-224ENST00000550446 ZMYND8Q9ULU4 1186 aaPredicted RBP22.91■■□□□ 1.26
LETMD1-224ENST00000550446 A0A1W2PRG0 241 aa22.9■■□□□ 1.26
LETMD1-224ENST00000550446 SLC44A5Q8NCS7 719 aa22.9■■□□□ 1.26
LETMD1-224ENST00000550446 DYNLL2Q96FJ2 89 aa22.9■■□□□ 1.26
LETMD1-224ENST00000550446 CHMP4BQ9H444 224 aaKnown RBP22.9■■□□□ 1.26
LETMD1-224ENST00000550446 SLC15A5A6NIM6 579 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 SPDYE16A6NNV3 312 aaPredicted RBP22.89■■□□□ 1.25
LETMD1-224ENST00000550446 ATP5JP18859 108 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 PTPREP23469 700 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 LHX8Q68G74 356 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 LBX2Q6XYB7 198 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 HOXC10Q9NYD6 342 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 IVNS1ABPQ9Y6Y0 642 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 PLXNB2O15031 1838 aa22.89■■□□□ 1.25
LETMD1-224ENST00000550446 MBD4O95243 580 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 SYN1P17600 705 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 ADD2P35612 726 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 ATP2B2Q01814 1243 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 COG2Q14746 738 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 MFSD14CQ5VZR4 134 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 TANGO6Q9C0B7 1094 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 FLRT1Q9NZU1 646 aa22.88■■□□□ 1.25
LETMD1-224ENST00000550446 TMEM179Q6ZVK1 233 aa22.87■■□□□ 1.25
LETMD1-224ENST00000550446 HAUS7Q99871 368 aa22.87■■□□□ 1.25
LETMD1-224ENST00000550446 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.87■■□□□ 1.25
LETMD1-224ENST00000550446 SWAP70Q9UH65 585 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms