RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-222ENST00000550155 UPK3BL2E5RIL1 263 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 TNK2Q07912 1038 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 FAM196AQ6ZSG2 479 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 REC114Q7Z4M0 266 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 DNAJB8Q8NHS0 232 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 FAM168AQ92567 244 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 REV1Q9UBZ9 1251 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 KLHL3Q9UH77 587 aa8.04□□□□□ -1.12
CNOT2-222ENST00000550155 SUPT16HQ9Y5B9 1047 aaKnown RBP8.04□□□□□ -1.12
CNOT2-222ENST00000550155 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
CNOT2-222ENST00000550155 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
CNOT2-222ENST00000550155 HTR3BO95264 441 aa8.03□□□□□ -1.12
CNOT2-222ENST00000550155 EIF4A3P38919 411 aaKnown RBP8.03□□□□□ -1.12
CNOT2-222ENST00000550155 AFMP43652 599 aa8.03□□□□□ -1.12
CNOT2-222ENST00000550155 SLFN12Q8IYM2 578 aa8.03□□□□□ -1.12
CNOT2-222ENST00000550155 FLAD1Q8NFF5 587 aa8.03□□□□□ -1.12
CNOT2-222ENST00000550155 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
CNOT2-222ENST00000550155 COPRSQ9NQ92 184 aa8.03□□□□□ -1.12
CNOT2-222ENST00000550155 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
CNOT2-222ENST00000550155 TLR3O15455 904 aaKnown RBP8.02□□□□□ -1.13
CNOT2-222ENST00000550155 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNOT2-222ENST00000550155 MRPL58Q14197 206 aaKnown RBP8.02□□□□□ -1.13
CNOT2-222ENST00000550155 TMPRSS7Q7RTY8 843 aa8.02□□□□□ -1.13
CNOT2-222ENST00000550155 CCDC74BQ96LY2 380 aa8.02□□□□□ -1.13
CNOT2-222ENST00000550155 GPATCH2Q9NW75 528 aa8.02□□□□□ -1.13
CNOT2-222ENST00000550155 OGFOD2Q6N063 350 aa8.01□□□□□ -1.13
CNOT2-222ENST00000550155 FBXL19Q6PCT2 694 aa8.01□□□□□ -1.13
CNOT2-222ENST00000550155 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
CNOT2-222ENST00000550155 TMEM87AQ8NBN3 555 aa8.01□□□□□ -1.13
CNOT2-222ENST00000550155 FBXO27Q8NI29 283 aa8.01□□□□□ -1.13
CNOT2-222ENST00000550155 TMEM40Q8WWA1 233 aa8.01□□□□□ -1.13
CNOT2-222ENST00000550155 POLR3KQ9Y2Y1 108 aaPredicted RBP8.01□□□□□ -1.13
CNOT2-222ENST00000550155 GARTP22102 1010 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 KCNMB1Q16558 191 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 ZSWIM9Q86XI8 627 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 HOMEZQ8IX15 550 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 PPP1R13LQ8WUF5 828 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 ZNF296Q8WUU4 475 aaPredicted RBP8□□□□□ -1.13
CNOT2-222ENST00000550155 RNF141Q8WVD5 230 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 CTNND2Q9UQB3 1225 aa8□□□□□ -1.13
CNOT2-222ENST00000550155 CHURC1-FNTBB4DL54 471 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 ZNF16P17020 682 aaPredicted RBP7.99□□□□□ -1.13
CNOT2-222ENST00000550155 GBP1P32455 592 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 CREG2Q8IUH2 290 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 POU5F2Q8N7G0 328 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 ALPK1Q96QP1 1244 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 LRRC3Q9BY71 257 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 KCNQ5Q9NR82 932 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
CNOT2-222ENST00000550155 CARMIL2Q6F5E8 1435 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 GREM1O60565 184 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 TPP2P29144 1249 aaPredicted RBP7.98□□□□□ -1.13
CNOT2-222ENST00000550155 GDNFP39905 211 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 MFAP1P55081 439 aaKnown RBP7.98□□□□□ -1.13
CNOT2-222ENST00000550155 DTWD2Q8NBA8 298 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 BAHD1Q8TBE0 780 aaPredicted RBP7.98□□□□□ -1.13
CNOT2-222ENST00000550155 SYTL4Q96C24 671 aaPredicted RBP7.98□□□□□ -1.13
CNOT2-222ENST00000550155 Q96M66 194 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 KRTAP4-12Q9BQ66 201 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 BRMS1Q9HCU9 246 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 SLAMF8Q9P0V8 285 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 PCDHB14Q9Y5E9 798 aa7.98□□□□□ -1.13
CNOT2-222ENST00000550155 RAC2P15153 192 aa7.97□□□□□ -1.13
CNOT2-222ENST00000550155 KREMEN1Q96MU8 473 aa7.97□□□□□ -1.13
CNOT2-222ENST00000550155 KIF2CQ99661 725 aa7.97□□□□□ -1.13
CNOT2-222ENST00000550155 ASPNQ9BXN1 380 aa7.97□□□□□ -1.13
CNOT2-222ENST00000550155 GPR62Q9BZJ7 368 aa7.97□□□□□ -1.13
CNOT2-222ENST00000550155 ASCC2Q9H1I8 757 aaPredicted RBP7.97□□□□□ -1.13
CNOT2-222ENST00000550155 DUSP15Q9H1R2 295 aaPredicted RBP7.97□□□□□ -1.13
CNOT2-222ENST00000550155 FARP2O94887 1054 aaPredicted RBP7.96□□□□□ -1.14
CNOT2-222ENST00000550155 RAG1P15918 1043 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 MCM4P33991 863 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 APOBRQ0VD83 1088 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 SEZ6Q53EL9 994 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 TMEM67Q5HYA8 995 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 KIRREL1Q96J84 757 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 GMIPQ9P107 970 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 DUSP13Q9UII6 198 aa7.96□□□□□ -1.14
CNOT2-222ENST00000550155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
CNOT2-222ENST00000550155 RGS13O14921 159 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 ATE1O95260 518 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 LTKP29376 864 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 ZNF76P36508 570 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 CLEC16AQ2KHT3 1053 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 ARSHQ5FYA8 562 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 TTC6Q86TZ1 520 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 TSPYL5Q86VY4 417 aaPredicted RBP7.95□□□□□ -1.14
CNOT2-222ENST00000550155 ADAMTS1Q9UHI8 967 aa7.95□□□□□ -1.14
CNOT2-222ENST00000550155 LRRC10BA6NIK2 292 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 SLC22A31A6NKX4 558 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 ESR1P03372 595 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 ZNF165P49910 485 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 RNF4P78317 190 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 NKD1Q969G9 470 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 SLC38A3Q99624 504 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.94□□□□□ -1.14
CNOT2-222ENST00000550155 UBP1Q9NZI7 540 aa7.94□□□□□ -1.14
CNOT2-222ENST00000550155 DNAJA2O60884 412 aa7.93□□□□□ -1.14
CNOT2-222ENST00000550155 LRRN2O75325 713 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms