RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 PPP2R3BQ9Y5P8 575 aa13.49□□□□□ -0.25
CTDSP2-206ENST00000550144 NID2Q14112 1375 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 PITPNM2Q9BZ72 1349 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 CDKL5O76039 1030 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 RXRAP19793 462 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 GJB2P29033 226 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 EPHX2P34913 555 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 ABCB5Q2M3G0 1257 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 CPLX2Q6PUV4 134 aaKnown RBP13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 USP50Q70EL3 339 aaPredicted RBP13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 NUP133Q8WUM0 1156 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 HOOK2Q96ED9 719 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 CEP95Q96GE4 821 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 TEPSINQ96N21 525 aa13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
CTDSP2-206ENST00000550144 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 NOVP48745 357 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 MAP3K10Q02779 954 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 RTN1Q16799 776 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 TMEM179Q6ZVK1 233 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 MIGA2Q7L4E1 593 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 DCPSQ96C86 337 aaKnown RBP13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 TMEM47Q9BQJ4 181 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
CTDSP2-206ENST00000550144 PTPDC1A2A3K4 754 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 JAK2O60674 1132 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 GDF11O95390 407 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 CTDNEP1O95476 244 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 TTLL1O95922 423 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 HSPA6P17066 643 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 CDC27P30260 824 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 ADD1P35611 737 aaKnown RBP13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 NUCB2P80303 420 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 TROAPQ12815 778 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 DCAF15Q66K64 600 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 CTCFLQ8NI51 663 aaPredicted RBP13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 KIF3AQ9Y496 699 aa13.46□□□□□ -0.25
CTDSP2-206ENST00000550144 GREB1LQ9C091 1923 aaPredicted RBP13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 GH2P01242 217 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 PDCP20941 246 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 KIF5BP33176 963 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 NBPF12Q5TAG4 269 aaPredicted RBP13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 SULF1Q8IWU6 871 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 ZC3H15Q8WU90 426 aaKnown RBP13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 FAM217BQ9NTX9 383 aaPredicted RBP13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 SCN4AP35499 1836 aa13.45□□□□□ -0.26
CTDSP2-206ENST00000550144 WDR90Q96KV7 1748 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 DTNBO60941 627 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 PDIA4P13667 645 aaKnown RBP13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 ATP2B2Q01814 1243 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 ICA1Q05084 483 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 RRP1BQ14684 758 aaKnown RBP13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 SEPT2Q15019 361 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 RAB3GAP1Q15042 981 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 SUPT20HL1Q3ZLR7 823 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
CTDSP2-206ENST00000550144 EEF2P13639 858 aaKnown RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 IFNAR1P17181 557 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 CAP2P40123 477 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 SSRP1Q08945 709 aaKnown RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 GRM4Q14833 912 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 NTRK3Q16288 839 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 SHROOM1Q2M3G4 852 aaPredicted RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 EAPPQ56P03 285 aaPredicted RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 LARP1BQ659C4 914 aaKnown RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 TRIM22Q8IYM9 498 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 LRRC47Q8N1G4 583 aaKnown RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 ZNF341Q9BYN7 854 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 ORC3Q9UBD5 711 aaPredicted RBP13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
CTDSP2-206ENST00000550144 WDR33Q9C0J8 1336 aaKnown RBP13.42□□□□□ -0.26
CTDSP2-206ENST00000550144 PHF20L1A8MW92 1017 aa13.42□□□□□ -0.26
CTDSP2-206ENST00000550144 POTECB2RU33 542 aa13.42□□□□□ -0.26
CTDSP2-206ENST00000550144 STX6O43752 255 aa13.42□□□□□ -0.26
CTDSP2-206ENST00000550144 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
CTDSP2-206ENST00000550144 SYT1P21579 422 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms