RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 GDF11O95390 407 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 ZAP70P43403 619 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 MAP2K5Q13163 448 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 CCL14Q16627 93 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 LBX2Q6XYB7 198 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 APBA2Q99767 749 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 UBE2OQ9C0C9 1292 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 MYH1P12882 1939 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
TRAFD1-207ENST00000550051 BCAR3O75815 825 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 GH2P01242 217 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 HOXC6P09630 235 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 CYP7A1P22680 504 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 DYNLL1P63167 89 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 CCNA1P78396 465 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 LRRC26Q2I0M4 334 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 CATSPERGQ6ZRH7 1159 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 KIAA1683Q9H0B3 1180 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 EHD4Q9H223 541 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 PIH1D3Q9NQM4 214 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 SAP30BPQ9UHR5 308 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 TNNQ9UQP3 1299 aa12.04□□□□□ -0.48
TRAFD1-207ENST00000550051 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 CNMDO75829 334 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 IGHA2P01877 340 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 PTPREP23469 700 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 USP14P54578 494 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 MFSD14CQ5VZR4 134 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 FAM109BQ6ICB4 259 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 TTC6Q86TZ1 520 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 TMEM57Q8N5G2 664 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 FRAT1Q92837 279 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 PAGR1Q9BTK6 254 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 SERPINB13Q9UIV8 391 aa12.03□□□□□ -0.48
TRAFD1-207ENST00000550051 A0A0C4DFX4 3053 aa12.02□□□□□ -0.48
TRAFD1-207ENST00000550051 CCER2I3L3R5 266 aa12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 MSCO60682 206 aa12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 CERKLQ49MI3 558 aaPredicted RBP12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 Q7L0L9 218 aa12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 MIER1Q8N108 512 aa12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 DBNLQ9UJU6 430 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-207ENST00000550051 USP5P45974 858 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 GRB14Q14449 540 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 ZKSCAN2Q63HK3 967 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 LPAR1Q92633 364 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 SENP6Q9GZR1 1112 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 BTBD7Q9P203 1132 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 FRMPD3Q5JV73 1810 aa12.01□□□□□ -0.49
TRAFD1-207ENST00000550051 DNM1LO00429 736 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 STRNO43815 780 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 IDH1O75874 414 aaKnown RBP12□□□□□ -0.49
TRAFD1-207ENST00000550051 VCAM1P19320 739 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 PLCD1P51178 756 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 MDM2Q00987 491 aaPredicted RBP12□□□□□ -0.49
TRAFD1-207ENST00000550051 MAP3K12Q12852 859 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 COG2Q14746 738 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 RAB3GAP1Q15042 981 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 MAGEB6Q8N7X4 407 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 MIGA1Q8NAN2 632 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 NPLOC4Q8TAT6 608 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 ACER1Q8TDN7 264 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 FEZ1Q99689 392 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 CCDC8Q9H0W5 538 aaPredicted RBP12□□□□□ -0.49
TRAFD1-207ENST00000550051 CWC22Q9HCG8 908 aaKnown RBP12□□□□□ -0.49
TRAFD1-207ENST00000550051 CABP5Q9NP86 173 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 HOXC10Q9NYD6 342 aa12□□□□□ -0.49
TRAFD1-207ENST00000550051 GUCY1A2P33402 732 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 SHMT1P34896 483 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 GABPAQ06546 454 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 ARRDC4Q8NCT1 418 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 LBHD1Q9BQE6 289 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 RIOK1Q9BRS2 568 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 TLR7Q9NYK1 1049 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 IVNS1ABPQ9Y6Y0 642 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 DNAH12Q6ZR08 3092 aa11.99□□□□□ -0.49
TRAFD1-207ENST00000550051 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
TRAFD1-207ENST00000550051 CNGA1P29973 690 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms