RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 SLIT2O94813 1529 aa8.68□□□□□ -1.02
UBE2N-204ENST00000549833 ABCC6O95255 1503 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 ITPKAP23677 461 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 CD68P34810 354 aaPredicted RBP8.67□□□□□ -1.02
UBE2N-204ENST00000549833 PTPN12Q05209 780 aaKnown RBP8.67□□□□□ -1.02
UBE2N-204ENST00000549833 RRS1Q15050 365 aaKnown RBP8.67□□□□□ -1.02
UBE2N-204ENST00000549833 SPRED3Q2MJR0 410 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 ARHGEF25Q86VW2 580 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 GALNT11Q8NCW6 608 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 BCO2Q9BYV7 579 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 ZNF576Q9H609 170 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 SPG7Q9UQ90 795 aa8.67□□□□□ -1.02
UBE2N-204ENST00000549833 BCL9LQ86UU0 1499 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 MAP3K19Q56UN5 1328 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 PRPF40AO75400 957 aaKnown RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 IGHA1P01876 353 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 ESRRAP11474 423 aaPredicted RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 C19orf57Q0VDD7 668 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 GPAT2Q6NUI2 795 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 GLIS3Q8NEA6 775 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 SETDB2Q96T68 719 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
UBE2N-204ENST00000549833 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
UBE2N-204ENST00000549833 AATKQ6ZMQ8 1374 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 GIPC1O14908 333 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 XRCC5P13010 732 aaKnown RBP8.65□□□□□ -1.02
UBE2N-204ENST00000549833 FCGRTP55899 365 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 ADGRE1Q14246 886 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 MBTPS1Q14703 1052 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 DTHD1Q6ZMT9 781 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 ZFYVE1Q9HBF4 777 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 BTG4Q9NY30 223 aa8.65□□□□□ -1.02
UBE2N-204ENST00000549833 RGS17Q9UGC6 210 aaPredicted RBP8.65□□□□□ -1.02
UBE2N-204ENST00000549833 GLI3P10071 1580 aa8.65□□□□□ -1.03
UBE2N-204ENST00000549833 COL5A2P05997 1499 aaPredicted RBP8.64□□□□□ -1.03
UBE2N-204ENST00000549833 E9PSI1 815 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
UBE2N-204ENST00000549833 MSTNO14793 375 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 ITGB2P05107 769 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 GATA4P43694 442 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 AMPHP49418 695 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
UBE2N-204ENST00000549833 KLHDC7BQ96G42 594 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 FRMD6Q96NE9 622 aa8.64□□□□□ -1.03
UBE2N-204ENST00000549833 ATRNO75882 1429 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
UBE2N-204ENST00000549833 RGPD1P0DJD0 1748 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
UBE2N-204ENST00000549833 HOXC9P31274 260 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 RPS26P11Q5JNZ5 115 aaPredicted RBP8.63□□□□□ -1.03
UBE2N-204ENST00000549833 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 TXNRD3Q86VQ6 643 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 UNC5CLQ8IV45 518 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 IP6K1Q92551 441 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
UBE2N-204ENST00000549833 POLKQ9UBT6 870 aa8.63□□□□□ -1.03
UBE2N-204ENST00000549833 RTL1A6NKG5 1358 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 FLT4P35916 1363 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 TM4SF5O14894 197 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 GNA15P30679 374 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 GSTT1P30711 240 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 EVA1CP58658 441 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 NLRP12P59046 1061 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 ACAD11Q709F0 780 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.62□□□□□ -1.03
UBE2N-204ENST00000549833 SPOCK3Q9BQ16 436 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 C12orf49Q9H741 205 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 AKTIPQ9H8T0 292 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 SHANK3Q9BYB0 1731 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 CDK12Q9NYV4 1490 aaPredicted RBP8.62□□□□□ -1.03
UBE2N-204ENST00000549833 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
UBE2N-204ENST00000549833 BLMP54132 1417 aaPredicted RBP8.62□□□□□ -1.03
UBE2N-204ENST00000549833 SBF2Q86WG5 1849 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 PARP4Q9UKK3 1724 aaKnown RBP8.61□□□□□ -1.03
UBE2N-204ENST00000549833 ADAM11O75078 769 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 B3GALT4O96024 378 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 PROCP04070 461 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 GSTM4Q03013 218 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 HSP90AB2PQ58FF8 381 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 HGSNATQ68CP4 663 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 ZNF772Q68DY9 489 aaPredicted RBP8.61□□□□□ -1.03
UBE2N-204ENST00000549833 ANKRD24Q8TF21 1146 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 KCNK4Q9NYG8 393 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 FAM8A1Q9UBU6 413 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 INSRP06213 1382 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
UBE2N-204ENST00000549833 THSD7AQ9UPZ6 1657 aa8.6□□□□□ -1.03
UBE2N-204ENST00000549833 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
UBE2N-204ENST00000549833 F8W735 103 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms