RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 NFKBIEO00221 500 aa28.51■■■□□ 2.16
TGFBR1-207ENST00000549766 BRAPQ7Z569 592 aa28.51■■■□□ 2.16
TGFBR1-207ENST00000549766 ZFPM1Q8IX07 1006 aa28.51■■■□□ 2.16
TGFBR1-207ENST00000549766 PNMA1Q8ND90 353 aa28.51■■■□□ 2.16
TGFBR1-207ENST00000549766 CTCFLQ8NI51 663 aaPredicted RBP28.51■■■□□ 2.16
TGFBR1-207ENST00000549766 LEO1Q8WVC0 666 aaPredicted RBP28.51■■■□□ 2.16
TGFBR1-207ENST00000549766 PRPF3O43395 683 aaKnown RBP28.51■■■□□ 2.15
TGFBR1-207ENST00000549766 PLEKHA8P1O95397 391 aa28.51■■■□□ 2.15
TGFBR1-207ENST00000549766 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.51■■■□□ 2.15
TGFBR1-207ENST00000549766 TAOK2Q9UL54 1235 aa28.51■■■□□ 2.15
TGFBR1-207ENST00000549766 HLA-DOAP06340 250 aa28.5■■■□□ 2.15
TGFBR1-207ENST00000549766 CCDC82Q8N4S0 544 aa28.5■■■□□ 2.15
TGFBR1-207ENST00000549766 PRMT6Q96LA8 375 aaPredicted RBP28.5■■■□□ 2.15
TGFBR1-207ENST00000549766 TMEM47Q9BQJ4 181 aa28.5■■■□□ 2.15
TGFBR1-207ENST00000549766 KIF28PB7ZC32 967 aa28.49■■■□□ 2.15
TGFBR1-207ENST00000549766 CACNB3P54284 484 aa28.49■■■□□ 2.15
TGFBR1-207ENST00000549766 AGBL3Q8NEM8 1001 aa28.49■■■□□ 2.15
TGFBR1-207ENST00000549766 SPATA32Q96LK8 384 aa28.49■■■□□ 2.15
TGFBR1-207ENST00000549766 TMEM63CQ9P1W3 806 aa28.49■■■□□ 2.15
TGFBR1-207ENST00000549766 LTBP3Q9NS15 1303 aa28.49■■■□□ 2.15
TGFBR1-207ENST00000549766 SHMT1P34896 483 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 ZNF396Q96N95 335 aaPredicted RBP28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 CNTNAP5Q8WYK1 1306 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 COL2A1P02458 1487 aaPredicted RBP28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 IGKV6D-41A0A0C4DH26 115 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 KIF5BP33176 963 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 TRIM29Q14134 588 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 GRM4Q14833 912 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 PKN1Q16512 942 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 SRBD1Q8N5C6 995 aaKnown RBP28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 TDRD3Q9H7E2 651 aaKnown RBP28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 HDAC9Q9UKV0 1011 aa28.48■■■□□ 2.15
TGFBR1-207ENST00000549766 SIPA1L1O43166 1804 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 SPDYE2BA6NHP3 402 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 ENTPD3O75355 529 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 SPDYE6P0CI01 402 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 U2AF2P26368 475 aaKnown RBP eCLIP28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 CXCL9Q07325 125 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 SH3BP5LQ7L8J4 393 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 CEP95Q96GE4 821 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 USP28Q96RU2 1077 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 RBM27Q9P2N5 1060 aaKnown RBP28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 RCOR1Q9UKL0 485 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 STX8Q9UNK0 236 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 ATRNL1Q5VV63 1379 aa28.47■■■□□ 2.15
TGFBR1-207ENST00000549766 GOLGB1Q14789 3259 aaKnown RBP28.46■■■□□ 2.15
TGFBR1-207ENST00000549766 FSD2A1L4K1 749 aa28.46■■■□□ 2.15
TGFBR1-207ENST00000549766 DDTLA6NHG4 134 aaPredicted RBP28.46■■■□□ 2.15
TGFBR1-207ENST00000549766 ZSCAN23Q3MJ62 389 aa28.46■■■□□ 2.15
TGFBR1-207ENST00000549766 BCS1LQ9Y276 419 aa28.46■■■□□ 2.15
TGFBR1-207ENST00000549766 ZBTB12Q9Y330 459 aaPredicted RBP28.46■■■□□ 2.15
TGFBR1-207ENST00000549766 MYSM1Q5VVJ2 828 aa28.45■■■□□ 2.15
TGFBR1-207ENST00000549766 METTL16Q86W50 562 aaKnown RBP28.45■■■□□ 2.15
TGFBR1-207ENST00000549766 KLHL34Q8N239 644 aa28.45■■■□□ 2.15
TGFBR1-207ENST00000549766 MTMR14Q8NCE2 650 aa28.45■■■□□ 2.15
TGFBR1-207ENST00000549766 DNAJC18Q9H819 358 aa28.45■■■□□ 2.15
TGFBR1-207ENST00000549766 PI4KBQ9UBF8 816 aa28.45■■■□□ 2.15
TGFBR1-207ENST00000549766 MMP1P03956 469 aa28.45■■■□□ 2.14
TGFBR1-207ENST00000549766 AKR1B1P15121 316 aa28.45■■■□□ 2.14
TGFBR1-207ENST00000549766 ZNF445P59923 1031 aa28.45■■■□□ 2.14
TGFBR1-207ENST00000549766 AKAP17AQ02040 695 aaKnown RBP28.45■■■□□ 2.14
TGFBR1-207ENST00000549766 TCP10Q12799 353 aa28.45■■■□□ 2.14
TGFBR1-207ENST00000549766 TOP1P11387 765 aaKnown RBP28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 OGFOD1Q8N543 542 aa28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 JDP2Q8WYK2 163 aa28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 MTMR4Q9NYA4 1195 aa28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 RTEL1Q9NZ71 1219 aa28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 MAD2L2Q9UI95 211 aa28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 V9GY48 417 aaPredicted RBP28.44■■■□□ 2.14
TGFBR1-207ENST00000549766 GNAQP50148 359 aa28.43■■■□□ 2.14
TGFBR1-207ENST00000549766 CIAPIN1Q6FI81 312 aa28.43■■■□□ 2.14
TGFBR1-207ENST00000549766 ISY1Q9ULR0 285 aaKnown RBP28.43■■■□□ 2.14
TGFBR1-207ENST00000549766 GREB1LQ9C091 1923 aaPredicted RBP28.43■■■□□ 2.14
TGFBR1-207ENST00000549766 FOXP4Q8IVH2 680 aaPredicted RBP28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 SHISA4Q96DD7 197 aa28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 PGBD1Q96JS3 809 aa28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 CCDC17Q96LX7 622 aa28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 FTOQ9C0B1 505 aaKnown RBP eCLIP28.42■■■□□ 2.141e-7■□□□□ 8.2
TGFBR1-207ENST00000549766 PALM3A6NDB9 673 aaPredicted RBP28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 DLGAP5Q15398 846 aa28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 NLGN2Q8NFZ4 835 aa28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 SYAP1Q96A49 352 aaPredicted RBP28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 POLR3EQ9NVU0 708 aa28.42■■■□□ 2.14
TGFBR1-207ENST00000549766 MYH8P13535 1937 aa28.41■■■□□ 2.14
TGFBR1-207ENST00000549766 ARFGEF1Q9Y6D6 1849 aa28.41■■■□□ 2.14
TGFBR1-207ENST00000549766 STAG2Q8N3U4 1231 aa28.41■■■□□ 2.14
TGFBR1-207ENST00000549766 ZBED3Q96IU2 234 aaPredicted RBP28.41■■■□□ 2.14
TGFBR1-207ENST00000549766 TATDN1Q6P1N9 297 aa28.4■■■□□ 2.14
TGFBR1-207ENST00000549766 FOXP1Q9H334 677 aaPredicted RBP28.4■■■□□ 2.14
TGFBR1-207ENST00000549766 KCNJ14Q9UNX9 436 aa28.4■■■□□ 2.14
TGFBR1-207ENST00000549766 MYH6P13533 1939 aa28.4■■■□□ 2.14
TGFBR1-207ENST00000549766 NASPP49321 788 aaPredicted RBP28.39■■■□□ 2.14
TGFBR1-207ENST00000549766 MMP14P50281 582 aa28.39■■■□□ 2.14
TGFBR1-207ENST00000549766 SPDYE2Q495Y8 402 aa28.39■■■□□ 2.14
TGFBR1-207ENST00000549766 PHF20Q9BVI0 1012 aa28.39■■■□□ 2.14
TGFBR1-207ENST00000549766 ZNF70Q9UC06 446 aaPredicted RBP28.39■■■□□ 2.14
TGFBR1-207ENST00000549766 XBP1P17861 261 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 CEBPZQ03701 1054 aaKnown RBP28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 TNIP1Q15025 636 aa28.38■■■□□ 2.13
TGFBR1-207ENST00000549766 SAFBQ15424 915 aaKnown RBP eCLIP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms