RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 SERPINB13Q9UIV8 391 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 GDF11O95390 407 aa16.6■□□□□ 0.25
CNOT2-220ENST00000549750 C12orf42Q96LP6 360 aa16.6■□□□□ 0.25
CNOT2-220ENST00000549750 C11orf49Q9H6J7 331 aa16.6■□□□□ 0.25
CNOT2-220ENST00000549750 PRDM6Q9NQX0 595 aa16.6■□□□□ 0.25
CNOT2-220ENST00000549750 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
CNOT2-220ENST00000549750 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
CNOT2-220ENST00000549750 PDE6AP16499 860 aa16.59■□□□□ 0.25
CNOT2-220ENST00000549750 SHROOM1Q2M3G4 852 aaPredicted RBP16.59■□□□□ 0.25
CNOT2-220ENST00000549750 GUCD1Q96NT3 240 aa16.59■□□□□ 0.25
CNOT2-220ENST00000549750 PLXNB2O15031 1838 aa16.59■□□□□ 0.25
CNOT2-220ENST00000549750 SPTBN5Q9NRC6 3674 aaKnown RBP16.58■□□□□ 0.25
CNOT2-220ENST00000549750 MAGEB6P1A0A0J9YX57 407 aa16.58■□□□□ 0.24
CNOT2-220ENST00000549750 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.24
CNOT2-220ENST00000549750 HMGCRP04035 888 aa16.58■□□□□ 0.24
CNOT2-220ENST00000549750 IRX3P78415 501 aaPredicted RBP16.58■□□□□ 0.24
CNOT2-220ENST00000549750 GABPAQ06546 454 aa16.58■□□□□ 0.24
CNOT2-220ENST00000549750 SLC9C2Q5TAH2 1124 aa16.58■□□□□ 0.24
CNOT2-220ENST00000549750 GTF3C2Q8WUA4 911 aaPredicted RBP16.58■□□□□ 0.24
CNOT2-220ENST00000549750 HMX1Q9NP08 348 aaPredicted RBP16.58■□□□□ 0.24
CNOT2-220ENST00000549750 LAMA2P24043 3122 aaKnown RBP16.57■□□□□ 0.24
CNOT2-220ENST00000549750 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 GH2P01242 217 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 ATP5JP18859 108 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 HERVK_113P62684 666 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 CRNKL1Q9BZJ0 848 aaKnown RBP16.57■□□□□ 0.24
CNOT2-220ENST00000549750 EMILIN3Q9NT22 766 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 GJD2Q9UKL4 321 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 MYH7P12883 1935 aa16.57■□□□□ 0.24
CNOT2-220ENST00000549750 GOLIM4O00461 696 aa16.56■□□□□ 0.24
CNOT2-220ENST00000549750 SHMT1P34896 483 aa16.56■□□□□ 0.24
CNOT2-220ENST00000549750 PLCD1P51178 756 aa16.56■□□□□ 0.24
CNOT2-220ENST00000549750 P2RX7Q99572 595 aaKnown RBP16.56■□□□□ 0.24
CNOT2-220ENST00000549750 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
CNOT2-220ENST00000549750 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
CNOT2-220ENST00000549750 APBB1O00213 710 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 USP14P54578 494 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 CERKLQ49MI3 558 aaPredicted RBP16.55■□□□□ 0.24
CNOT2-220ENST00000549750 GPRC5AQ8NFJ5 357 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 FAM161BQ96MY7 647 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 DNAJC2Q99543 621 aaKnown RBP16.55■□□□□ 0.24
CNOT2-220ENST00000549750 HAUS7Q99871 368 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
CNOT2-220ENST00000549750 ADD2P35612 726 aa16.54■□□□□ 0.24
CNOT2-220ENST00000549750 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
CNOT2-220ENST00000549750 SOCS4Q8WXH5 440 aa16.54■□□□□ 0.24
CNOT2-220ENST00000549750 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
CNOT2-220ENST00000549750 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
CNOT2-220ENST00000549750 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
CNOT2-220ENST00000549750 XRCC5P13010 732 aaKnown RBP16.53■□□□□ 0.24
CNOT2-220ENST00000549750 MAPK4P31152 587 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 MDM2Q00987 491 aaPredicted RBP16.53■□□□□ 0.24
CNOT2-220ENST00000549750 TRIM32Q13049 653 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 LBX2Q6XYB7 198 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 LCORLQ8N3X6 602 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 LRRCC1Q9C099 1032 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.53■□□□□ 0.243e-6■□□□□ 9.6
CNOT2-220ENST00000549750 CABP5Q9NP86 173 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 MYH8P13535 1937 aa16.53■□□□□ 0.24
CNOT2-220ENST00000549750 PRUNE2Q8WUY3 3088 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 PFASO15067 1338 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 EYSQ5T1H1 3165 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 GUCY1A2P33402 732 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 ERVK-9P63128 1117 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 ERVK-24P63145 666 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 SDR42E1Q8WUS8 393 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
CNOT2-220ENST00000549750 FEZ1Q99689 392 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 ATP8A2Q9NTI2 1148 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
CNOT2-220ENST00000549750 VCAM1P19320 739 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 MAP3K21Q5TCX8 1036 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 ZNF697Q5TEC3 545 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 USP6NLQ92738 828 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 NUDT12Q9BQG2 462 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 RABGAP1Q9Y3P9 1069 aa16.51■□□□□ 0.23
CNOT2-220ENST00000549750 BAZ2AQ9UIF9 1905 aaKnown RBP16.51■□□□□ 0.23
CNOT2-220ENST00000549750 COL6A1P12109 1028 aa16.5■□□□□ 0.23
CNOT2-220ENST00000549750 Q3C1V9 767 aa16.5■□□□□ 0.23
CNOT2-220ENST00000549750 TRMT44Q8IYL2 757 aaKnown RBP16.5■□□□□ 0.23
CNOT2-220ENST00000549750 TRIB2Q92519 343 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms