RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 SEPT2Q15019 361 aa23.53■■□□□ 1.36
ATF1-202ENST00000549612 ZYXQ15942 572 aaKnown RBP23.53■■□□□ 1.36
ATF1-202ENST00000549612 RBPJLQ9UBG7 517 aa23.53■■□□□ 1.36
ATF1-202ENST00000549612 GJD2Q9UKL4 321 aa23.53■■□□□ 1.36
ATF1-202ENST00000549612 DOCK3Q8IZD9 2030 aa23.53■■□□□ 1.36
ATF1-202ENST00000549612 USP17L15C9J2P7 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L13C9JLJ4 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L11C9JVI0 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L18D6R9N7 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L22D6RA61 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L17D6RBQ6 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L19D6RCP7 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L20D6RJB6 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 VCAM1P19320 739 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 USP17L24Q0WX57 530 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 POTEEQ6S8J3 1075 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 KBTBD3Q8NAB2 608 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 SLC44A5Q8NCS7 719 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 PUS7LQ9H0K6 701 aaKnown RBP23.52■■□□□ 1.36
ATF1-202ENST00000549612 UNC93B1Q9H1C4 597 aa23.52■■□□□ 1.36
ATF1-202ENST00000549612 PEX10O60683 326 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 ERVK-9P63128 1117 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 ERVK-24P63145 666 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 C12orf60Q5U649 245 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 TSHZ3Q63HK5 1081 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 DYNLL2Q96FJ2 89 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 SLC4A4Q9Y6R1 1079 aa23.51■■□□□ 1.35
ATF1-202ENST00000549612 CATSPERGQ6ZRH7 1159 aa23.5■■□□□ 1.35
ATF1-202ENST00000549612 TMEM179Q6ZVK1 233 aa23.5■■□□□ 1.35
ATF1-202ENST00000549612 DDRGK1Q96HY6 314 aa23.5■■□□□ 1.35
ATF1-202ENST00000549612 USP17L12C9JPN9 530 aa23.49■■□□□ 1.35
ATF1-202ENST00000549612 USP17L21D6R901 530 aa23.49■■□□□ 1.35
ATF1-202ENST00000549612 MPHOSPH10O00566 681 aaKnown RBP23.49■■□□□ 1.35
ATF1-202ENST00000549612 MAPK4P31152 587 aa23.49■■□□□ 1.35
ATF1-202ENST00000549612 AMOTL1Q8IY63 956 aa23.49■■□□□ 1.35
ATF1-202ENST00000549612 U2AF1L4Q8WU68 220 aaKnown RBP23.49■■□□□ 1.35
ATF1-202ENST00000549612 RABGAP1Q9Y3P9 1069 aa23.49■■□□□ 1.35
ATF1-202ENST00000549612 TTC41PQ6P2S7 1318 aa23.49■■□□□ 1.35
ATF1-202ENST00000549612 CYP2D7A0A087X1C5 515 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 A0A1W2PRG0 241 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 Q3C1V9 767 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 LBX2Q6XYB7 198 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 C16orf86Q6ZW13 317 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 UBE2Q1Q7Z7E8 422 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 STRBPQ96SI9 672 aaKnown RBP23.48■■□□□ 1.35
ATF1-202ENST00000549612 PAGR1Q9BTK6 254 aa23.48■■□□□ 1.35
ATF1-202ENST00000549612 PAK6Q9NQU5 681 aaPredicted RBP23.48■■□□□ 1.35
ATF1-202ENST00000549612 BAZ2AQ9UIF9 1905 aaKnown RBP23.48■■□□□ 1.35
ATF1-202ENST00000549612 SMIM22K7EJ46 135 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 HMGCRP04035 888 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 AKR1B1P15121 316 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 CDK8P49336 464 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 CTR9Q6PD62 1173 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 APPBP2Q92624 585 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 CCDC17Q96LX7 622 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 PORCNQ9H237 461 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 RPAP3Q9H6T3 665 aaPredicted RBP23.47■■□□□ 1.35
ATF1-202ENST00000549612 PLXNB2O15031 1838 aa23.47■■□□□ 1.35
ATF1-202ENST00000549612 RNF113AO15541 343 aaKnown RBP23.46■■□□□ 1.35
ATF1-202ENST00000549612 CNMDO75829 334 aa23.46■■□□□ 1.35
ATF1-202ENST00000549612 SGPL1O95470 568 aa23.46■■□□□ 1.35
ATF1-202ENST00000549612 ZFYP08048 801 aaPredicted RBP23.46■■□□□ 1.35
ATF1-202ENST00000549612 CAPN2P17655 700 aa23.46■■□□□ 1.35
ATF1-202ENST00000549612 OSBP2Q969R2 916 aa23.46■■□□□ 1.35
ATF1-202ENST00000549612 CRBNQ96SW2 442 aa23.46■■□□□ 1.35
ATF1-202ENST00000549612 NUDT12Q9BQG2 462 aa23.46■■□□□ 1.35
ATF1-202ENST00000549612 ARPP21Q9UBL0 812 aaPredicted RBP23.46■■□□□ 1.35
ATF1-202ENST00000549612 ERC2O15083 957 aa23.45■■□□□ 1.34
ATF1-202ENST00000549612 SLC34A2O95436 690 aa23.45■■□□□ 1.34
ATF1-202ENST00000549612 XRCC5P13010 732 aaKnown RBP23.45■■□□□ 1.34
ATF1-202ENST00000549612 GIMAP6Q6P9H5 292 aa23.45■■□□□ 1.34
ATF1-202ENST00000549612 GPR142Q7Z601 462 aa23.45■■□□□ 1.34
ATF1-202ENST00000549612 SIAH1Q8IUQ4 282 aa23.45■■□□□ 1.34
ATF1-202ENST00000549612 PI4K2BQ8TCG2 481 aa23.45■■□□□ 1.34
ATF1-202ENST00000549612 SPDYE16A6NNV3 312 aaPredicted RBP23.44■■□□□ 1.34
ATF1-202ENST00000549612 GSG1L2A8MUP6 293 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 GLRX3O76003 335 aaKnown RBP23.44■■□□□ 1.34
ATF1-202ENST00000549612 CCNA1P78396 465 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 ICA1Q05084 483 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 SBK1Q52WX2 424 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 PLEKHH3Q7Z736 793 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 OTUD7AQ8TE49 926 aaPredicted RBP23.44■■□□□ 1.34
ATF1-202ENST00000549612 TRIB2Q92519 343 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 USP6NLQ92738 828 aa23.44■■□□□ 1.34
ATF1-202ENST00000549612 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
ATF1-202ENST00000549612 MORN1Q5T089 497 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 CLEC10AQ8IUN9 316 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 CCAR1Q8IX12 1150 aaKnown RBP23.43■■□□□ 1.34
ATF1-202ENST00000549612 LPAR1Q92633 364 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 DEFB118Q96PH6 123 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 CRISPLD2Q9H0B8 497 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.43■■□□□ 1.346e-7■■■■□ 21.6
ATF1-202ENST00000549612 SH2D4AQ9H788 454 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 ARHGEF10LQ9HCE6 1279 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 TMX2Q9Y320 296 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 MYH8P13535 1937 aa23.43■■□□□ 1.34
ATF1-202ENST00000549612 SALL3Q9BXA9 1300 aa23.42■■□□□ 1.34
ATF1-202ENST00000549612 FARP2O94887 1054 aaPredicted RBP23.42■■□□□ 1.34
ATF1-202ENST00000549612 CYP2B6P20813 491 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms