RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 FOXD4L3Q6VB84 417 aaPredicted RBP12.41□□□□□ -0.42
PRIM1-204ENST00000549549 SCUBE1Q8IWY4 988 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 RNF214Q8ND24 703 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
PRIM1-204ENST00000549549 CCDC74BQ96LY2 380 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 RUSC1Q9BVN2 902 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 DISC1Q9NRI5 854 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 KCNK4Q9NYG8 393 aa12.41□□□□□ -0.42
PRIM1-204ENST00000549549 G3BP2Q9UN86 482 aaKnown RBP12.41□□□□□ -0.42
PRIM1-204ENST00000549549 SOX5P35711 763 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
PRIM1-204ENST00000549549 RNFT1Q5M7Z0 435 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 RNF180Q86T96 592 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 PHACTR4Q8IZ21 702 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
PRIM1-204ENST00000549549 CLUHP3Q96NS8 147 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 HAUS7Q99871 368 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 FBRSQ9HAH7 460 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 RAD18Q9NS91 495 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 NXF1Q9UBU9 619 aaKnown RBP12.4□□□□□ -0.42
PRIM1-204ENST00000549549 MAPRE3Q9UPY8 281 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 FAN1Q9Y2M0 1017 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 SUGT1Q9Y2Z0 365 aa12.4□□□□□ -0.42
PRIM1-204ENST00000549549 TRBV23-1A0A0A0MS06 115 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 GSG1L2A8MUP6 293 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 PDE8AO60658 829 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 DEAF1O75398 565 aaPredicted RBP12.39□□□□□ -0.43
PRIM1-204ENST00000549549 RAPGEF3O95398 923 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 VSIG8P0DPA2 414 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
PRIM1-204ENST00000549549 SRSF11Q05519 484 aaKnown RBP12.39□□□□□ -0.43
PRIM1-204ENST00000549549 CHSY3Q70JA7 882 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRIM1-204ENST00000549549 ACDQ96AP0 544 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 BTBD6Q96KE9 485 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 CDC6Q99741 560 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 AARSD1Q9BTE6 412 aaKnown RBP12.39□□□□□ -0.43
PRIM1-204ENST00000549549 MRPL4Q9BYD3 311 aaKnown RBP12.39□□□□□ -0.43
PRIM1-204ENST00000549549 TMPRSS13Q9BYE2 586 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 KLHL25Q9H0H3 589 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 PICK1Q9NRD5 415 aa12.39□□□□□ -0.43
PRIM1-204ENST00000549549 MEGF11A6BM72 1044 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 C9IYK1 514 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 EPHX1P07099 455 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 NID1P14543 1247 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 YOD1Q5VVQ6 348 aaPredicted RBP12.38□□□□□ -0.43
PRIM1-204ENST00000549549 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
PRIM1-204ENST00000549549 DTWD1Q8N5C7 304 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 EDARADDQ8WWZ3 215 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 FANCD2OSQ96PS1 177 aa12.38□□□□□ -0.43
PRIM1-204ENST00000549549 COL25A1Q9BXS0 654 aaPredicted RBP12.38□□□□□ -0.43
PRIM1-204ENST00000549549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRIM1-204ENST00000549549 H3BM21 787 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 FGFR1P11362 822 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 PMLP29590 882 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 EVA1CP58658 441 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 PPP2R2AP63151 447 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 SLBPQ14493 270 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRIM1-204ENST00000549549 NKG7Q16617 165 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 ANKRD39Q53RE8 183 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 AXDND1Q5T1B0 1012 aaPredicted RBP12.37□□□□□ -0.43
PRIM1-204ENST00000549549 HEATR6Q6AI08 1181 aaKnown RBP12.37□□□□□ -0.43
PRIM1-204ENST00000549549 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
PRIM1-204ENST00000549549 INTS7Q9NVH2 962 aaKnown RBP12.37□□□□□ -0.43
PRIM1-204ENST00000549549 DNAJC25-GNG10A0A024R161 153 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 CLEC3AO75596 197 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 TP53P04637 393 aaPredicted RBP12.36□□□□□ -0.43
PRIM1-204ENST00000549549 ITGAVP06756 1048 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 GBP1P32455 592 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 BAHD1Q8TBE0 780 aaPredicted RBP12.36□□□□□ -0.43
PRIM1-204ENST00000549549 CYB5D2Q8WUJ1 264 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 IPO9Q96P70 1041 aaKnown RBP12.36□□□□□ -0.43
PRIM1-204ENST00000549549 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
PRIM1-204ENST00000549549 CST3P01034 146 aaPredicted RBP12.35□□□□□ -0.43
PRIM1-204ENST00000549549 NFKB2Q00653 900 aa12.35□□□□□ -0.43
PRIM1-204ENST00000549549 BRDTQ58F21 947 aaPredicted RBP12.35□□□□□ -0.43
PRIM1-204ENST00000549549 TDRD10Q5VZ19 366 aaKnown RBP12.35□□□□□ -0.43
PRIM1-204ENST00000549549 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
PRIM1-204ENST00000549549 ALG1L2C9J202 215 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 ZNF227Q86WZ6 799 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 GALNT6Q8NCL4 622 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 LRRN4CLQ8ND94 238 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 UBASH3BQ8TF42 649 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 GSX1Q9H4S2 264 aaPredicted RBP12.34□□□□□ -0.43
PRIM1-204ENST00000549549 SUGCTQ9HAC7 445 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 LRRC4BQ9NT99 713 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 MAGEC2Q9UBF1 373 aaPredicted RBP12.34□□□□□ -0.43
PRIM1-204ENST00000549549 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 MCM8Q9UJA3 840 aa12.34□□□□□ -0.43
PRIM1-204ENST00000549549 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
PRIM1-204ENST00000549549 NEFMP07197 916 aa12.33□□□□□ -0.44
PRIM1-204ENST00000549549 AFAP1L2Q8N4X5 818 aa12.33□□□□□ -0.44
PRIM1-204ENST00000549549 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms