RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 KRT24Q2M2I5 525 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 CDC42EP5Q6NZY7 148 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 RIF1Q5UIP0 2472 aaKnown RBP13.41□□□□□ -0.26
TROAP-210ENST00000549534 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
TROAP-210ENST00000549534 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 H7C1W4 665 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 ENTPD3O75355 529 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 KCNA5P22460 613 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 ZP2Q05996 745 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 GRB10Q13322 594 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 GRB14Q14449 540 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
TROAP-210ENST00000549534 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 EDAQ92838 391 aa13.4□□□□□ -0.26
TROAP-210ENST00000549534 ALG13Q9NP73 1137 aaKnown RBP13.4□□□□□ -0.26
TROAP-210ENST00000549534 CHD6Q8TD26 2715 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 CA3P07451 260 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 FAM47AQ5JRC9 791 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 ARNTL2Q8WYA1 636 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
TROAP-210ENST00000549534 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
TROAP-210ENST00000549534 AS3MTQ9HBK9 375 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 STARD7Q9NQZ5 370 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 IVNS1ABPQ9Y6Y0 642 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 DOCK1Q14185 1865 aa13.39□□□□□ -0.27
TROAP-210ENST00000549534 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 CHL1O00533 1208 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 TBC1D12O60347 775 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 PEX10O60683 326 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 IGKV5-2P06315 115 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
TROAP-210ENST00000549534 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
TROAP-210ENST00000549534 ST3GAL2Q16842 350 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
TROAP-210ENST00000549534 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
TROAP-210ENST00000549534 CERS4Q9HA82 394 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
TROAP-210ENST00000549534 NCOR2Q9Y618 2525 aa13.38□□□□□ -0.27
TROAP-210ENST00000549534 TMEM221A6NGB7 291 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 M0R296 226 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 RARBP10826 455 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 NBL1P41271 181 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
TROAP-210ENST00000549534 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 VPS37DQ86XT2 251 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 ADHFE1Q8IWW8 467 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 ZFPM1Q8IX07 1006 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 IDI2Q9BXS1 227 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 RABGAP1Q9Y3P9 1069 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 ACACBO00763 2458 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
TROAP-210ENST00000549534 GBF1Q92538 1859 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 USP17L5A8MUK1 530 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 LPXNO60711 386 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 FRAT2O75474 233 aaPredicted RBP13.36□□□□□ -0.27
TROAP-210ENST00000549534 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 NEXNQ0ZGT2 675 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 NBPF20Q3BBV1 942 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 TRIM67Q6ZTA4 783 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 USP40Q9NVE5 1235 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 NRBP1Q9UHY1 535 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 BRWD1Q9NSI6 2320 aa13.36□□□□□ -0.27
TROAP-210ENST00000549534 MOXD2PA6NHM9 499 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 PLIN1O60240 522 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 IRS1P35568 1242 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 CDK7P50613 346 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 BACE1P56817 501 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 TAP1Q03518 808 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 PUM1Q14671 1186 aaKnown RBP eCLIP13.35□□□□□ -0.27
TROAP-210ENST00000549534 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
TROAP-210ENST00000549534 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
TROAP-210ENST00000549534 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
TROAP-210ENST00000549534 WDR18Q9BV38 432 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 PPP1R12CQ9BZL4 782 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 MUTYHQ9UIF7 546 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 ELP1O95163 1332 aa13.35□□□□□ -0.27
TROAP-210ENST00000549534 COL4A6Q14031 1691 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 TECTAO75443 2155 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 GCKRQ14397 625 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 WDR78Q5VTH9 848 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 DPP9Q86TI2 863 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 RMDN1Q96DB5 314 aa13.34□□□□□ -0.27
TROAP-210ENST00000549534 DNAH14Q0VDD8 3507 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms