RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 ARRDC4Q8NCT1 418 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 TRPV1Q8NER1 839 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 TGFBRAP1Q8WUH2 860 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 LRP2BPQ9P2M1 347 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 ZBTB21Q9ULJ3 1066 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 RABGAP1Q9Y3P9 1069 aa13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-206ENST00000549358 BAG3O95817 575 aa13.31□□□□□ -0.28
TRAFD1-206ENST00000549358 ZYXQ15942 572 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-206ENST00000549358 TRIM60Q495X7 471 aa13.31□□□□□ -0.28
TRAFD1-206ENST00000549358 FAM9BQ8IZU0 186 aa13.31□□□□□ -0.28
TRAFD1-206ENST00000549358 NPLOC4Q8TAT6 608 aa13.31□□□□□ -0.28
TRAFD1-206ENST00000549358 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
TRAFD1-206ENST00000549358 MAST2Q6P0Q8 1798 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L15C9J2P7 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L13C9JLJ4 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 KBTBD13C9JR72 458 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L11C9JVI0 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L18D6R9N7 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L22D6RA61 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L17D6RBQ6 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L19D6RCP7 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L20D6RJB6 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 HOXC6P09630 235 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 ANO1Q5XXA6 986 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 GINM1Q9NU53 330 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 IVNS1ABPQ9Y6Y0 642 aa13.3□□□□□ -0.28
TRAFD1-206ENST00000549358 MUC3AQ02505 3323 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 TNFRSF10AO00220 468 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 GH2P01242 217 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 TJAP1Q5JTD0 557 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 CATSPERGQ6ZRH7 1159 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 TRIM43Q96BQ3 446 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 SAP30BPQ9UHR5 308 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 FLT1P17948 1338 aa13.29□□□□□ -0.28
TRAFD1-206ENST00000549358 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 CYBAP13498 195 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 PLCG2P16885 1265 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 ADCYAP1R1P41586 468 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 MCAMP43121 646 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 GRB14Q14449 540 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 GRIN2CQ14957 1233 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 NAA16Q6N069 864 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 DPP9Q86TI2 863 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 FERMT2Q96AC1 680 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 FEZ1Q99689 392 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
TRAFD1-206ENST00000549358 LTBP2Q14767 1821 aa13.27□□□□□ -0.28
TRAFD1-206ENST00000549358 ITGB8P26012 769 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 ARID4AP29374 1257 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 PPP4CP60510 307 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 SNX17Q15036 470 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 ADGRA1Q86SQ6 560 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 C12orf42Q96LP6 360 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 MEIS3Q99687 375 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 ZNF521Q96K83 1311 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 FRMPD3Q5JV73 1810 aa13.27□□□□□ -0.29
TRAFD1-206ENST00000549358 SEPT4O43236 478 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 IGHA2P01877 340 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 HLA-DOAP06340 250 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 VCAM1P19320 739 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 USP14P54578 494 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 EPHB4P54760 987 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 EVX2Q03828 476 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 TLE2Q04725 743 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 RAB3GAP1Q15042 981 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 PRAMEF19Q5SWL8 479 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 NOB1Q9ULX3 412 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-206ENST00000549358 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 TMEM265A0A087WTH1 108 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 ADORA2AP29274 412 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 LBX2Q6XYB7 198 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 KIAA1683Q9H0B3 1180 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
TRAFD1-206ENST00000549358 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 E9PSI1 815 aa13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 ANP32CO43423 234 aa13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 STRNO43815 780 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms