RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
DDX54-206ENST00000549271 XAGE2Q96GT9 111 aa15□□□□□ -0.01
DDX54-206ENST00000549271 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
DDX54-206ENST00000549271 ASB2Q96Q27 587 aa15□□□□□ -0.01
DDX54-206ENST00000549271 MYO9BQ13459 2157 aa15□□□□□ -0.01
DDX54-206ENST00000549271 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 USP17L10C9JJH3 530 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
DDX54-206ENST00000549271 CYBAP13498 195 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 PTPREP23469 700 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 EPHB4P54760 987 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
DDX54-206ENST00000549271 ADAMTS19Q8TE59 1207 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
DDX54-206ENST00000549271 KBTBD13C9JR72 458 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 DNAJB2P25686 324 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 ITGB8P26012 769 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 CYP2C19P33261 490 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 TFCP2Q12800 502 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 GRB14Q14449 540 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 NPLOC4Q8TAT6 608 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 CLUAP1Q96AJ1 413 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 CWC22Q9HCG8 908 aaKnown RBP14.98□□□□□ -0.01
DDX54-206ENST00000549271 EMILIN3Q9NT22 766 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 NDUFB9Q9Y6M9 179 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 FOCADQ5VW36 1801 aa14.98□□□□□ -0.01
DDX54-206ENST00000549271 CCNA1P78396 465 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 SHROOM1Q2M3G4 852 aaPredicted RBP14.97□□□□□ -0.01
DDX54-206ENST00000549271 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 METTL16Q86W50 562 aaKnown RBP14.97□□□□□ -0.01
DDX54-206ENST00000549271 ZNF576Q9H609 170 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 DNAJC18Q9H819 358 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 CHD7Q9P2D1 2997 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 THEGQ9P2T0 379 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 PI4KBQ9UBF8 816 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 PLXNA1Q9UIW2 1896 aa14.97□□□□□ -0.01
DDX54-206ENST00000549271 SYNGAP1Q96PV0 1343 aa14.96□□□□□ -0.01
DDX54-206ENST00000549271 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.96□□□□□ -0.01
DDX54-206ENST00000549271 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.96□□□□□ -0.01
DDX54-206ENST00000549271 XIRP2A4UGR9 3374 aa14.96□□□□□ -0.01
DDX54-206ENST00000549271 AKNAD1Q5T1N1 836 aa14.96□□□□□ -0.01
DDX54-206ENST00000549271 TMEM57Q8N5G2 664 aa14.96□□□□□ -0.01
DDX54-206ENST00000549271 NSUN4Q96CB9 384 aaKnown RBP14.96□□□□□ -0.01
DDX54-206ENST00000549271 UHRF1Q96T88 793 aaPredicted RBP14.96□□□□□ -0.01
DDX54-206ENST00000549271 GINM1Q9NU53 330 aa14.96□□□□□ -0.01
DDX54-206ENST00000549271 HMG20BQ9P0W2 317 aa14.96□□□□□ -0.01
DDX54-206ENST00000549271 GNAI2P04899 355 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 LDHCP07864 332 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 ARID4AP29374 1257 aaPredicted RBP14.95□□□□□ -0.02
DDX54-206ENST00000549271 ADCYAP1R1P41586 468 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 GSTO1P78417 241 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 MRPS5P82675 430 aaKnown RBP14.95□□□□□ -0.02
DDX54-206ENST00000549271 TLE2Q04725 743 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 DHX36Q9H2U1 1008 aaKnown RBP14.95□□□□□ -0.02
DDX54-206ENST00000549271 ZBTB21Q9ULJ3 1066 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 ARIH1Q9Y4X5 557 aaPredicted RBP14.95□□□□□ -0.02
DDX54-206ENST00000549271 TACC3Q9Y6A5 838 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.95□□□□□ -0.02
DDX54-206ENST00000549271 SMCHD1A6NHR9 2005 aa14.95□□□□□ -0.02
DDX54-206ENST00000549271 TCF20Q9UGU0 1960 aaKnown RBP14.94□□□□□ -0.02
DDX54-206ENST00000549271 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 SEPT4O43236 478 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 LBX2Q6XYB7 198 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 SPATA5Q8NB90 893 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 TIFAQ96CG3 184 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 NEUROD6Q96NK8 337 aa14.94□□□□□ -0.02
DDX54-206ENST00000549271 USP17L15C9J2P7 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L13C9JLJ4 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L11C9JVI0 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L18D6R9N7 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L22D6RA61 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L17D6RBQ6 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L19D6RCP7 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L20D6RJB6 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 GDF11O95390 407 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 CLTBP09497 229 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 RLBP1P12271 317 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 FPGSQ05932 587 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 USP17L24Q0WX57 530 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 LRRC41Q15345 812 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 WDR78Q5VTH9 848 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 ANO1Q5XXA6 986 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 FOXP4Q8IVH2 680 aaPredicted RBP14.93□□□□□ -0.02
DDX54-206ENST00000549271 SH3RF3Q8TEJ3 882 aaPredicted RBP14.93□□□□□ -0.02
DDX54-206ENST00000549271 PPM1EQ8WY54 764 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
DDX54-206ENST00000549271 C1QTNF1Q9BXJ1 281 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 GPR108Q9NPR9 543 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 BTBD7Q9P203 1132 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 IVNS1ABPQ9Y6Y0 642 aa14.93□□□□□ -0.02
DDX54-206ENST00000549271 PNMA6EA0A0J9YXQ4 647 aa14.92□□□□□ -0.02
DDX54-206ENST00000549271 IGSF3O75054 1194 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms