RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
CACNB3-211ENST00000549226 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
CACNB3-211ENST00000549226 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.54■□□□□ 0.24
CACNB3-211ENST00000549226 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-211ENST00000549226 RBM28Q9NW13 759 aaKnown RBP16.54■□□□□ 0.24
CACNB3-211ENST00000549226 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
CACNB3-211ENST00000549226 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-211ENST00000549226 STX8Q9UNK0 236 aa16.54■□□□□ 0.24
CACNB3-211ENST00000549226 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
CACNB3-211ENST00000549226 GOLGA8AA7E2F4 631 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 LARGE1O95461 756 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 ASNSP08243 561 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 KIF5BP33176 963 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
CACNB3-211ENST00000549226 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 KRT26Q7Z3Y9 468 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 CCDC83Q8IWF9 413 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
CACNB3-211ENST00000549226 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-211ENST00000549226 SIPA1L1O43166 1804 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 POTECB2RU33 542 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 CPLX1O14810 134 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
CACNB3-211ENST00000549226 NF2P35240 595 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 CAP2P40123 477 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 SLC4A3P48751 1232 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 SCRN1Q12765 414 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 TROAPQ12815 778 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 RTN1Q16799 776 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 MICU3Q86XE3 530 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-211ENST00000549226 MKL1Q969V6 931 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
CACNB3-211ENST00000549226 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
CACNB3-211ENST00000549226 FAM196BA6NMK8 535 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 NMT2O60551 498 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 GNAQP50148 359 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 ICA1Q05084 483 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 STK3Q13188 491 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-211ENST00000549226 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
CACNB3-211ENST00000549226 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 TMEM47Q9BQJ4 181 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
CACNB3-211ENST00000549226 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 PPP1R12BO60237 982 aaPredicted RBP16.5■□□□□ 0.23
CACNB3-211ENST00000549226 GH2P01242 217 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 PDCP20941 246 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 RGS22Q8NE09 1264 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 ARHGEF10LQ9HCE6 1279 aa16.5■□□□□ 0.23
CACNB3-211ENST00000549226 GDF11O95390 407 aa16.49■□□□□ 0.23
CACNB3-211ENST00000549226 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
CACNB3-211ENST00000549226 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
CACNB3-211ENST00000549226 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
CACNB3-211ENST00000549226 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
CACNB3-211ENST00000549226 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
CACNB3-211ENST00000549226 UNCXA6NJT0 531 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 IFNAR1P17181 557 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 CCT2P78371 535 aaKnown RBP16.48■□□□□ 0.23
CACNB3-211ENST00000549226 GRM4Q14833 912 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 SEPT2Q15019 361 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 NOL9Q5SY16 702 aaKnown RBP16.48■□□□□ 0.23
CACNB3-211ENST00000549226 NSUN7Q8NE18 718 aaKnown RBP16.48■□□□□ 0.23
CACNB3-211ENST00000549226 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
CACNB3-211ENST00000549226 STK36Q9NRP7 1315 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 PTPDC1A2A3K4 754 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 ADM5C9JUS6 153 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
CACNB3-211ENST00000549226 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 DDIT3P35638 169 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 IREB2P48200 963 aaKnown RBP16.47■□□□□ 0.23
CACNB3-211ENST00000549226 NUCB2P80303 420 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 GPATCH4Q5T3I0 446 aaKnown RBP16.47■□□□□ 0.23
CACNB3-211ENST00000549226 TRIM22Q8IYM9 498 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 DCAF4Q8WV16 495 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 WASF1Q92558 559 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 CDCA5Q96FF9 252 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 WRNIP1Q96S55 665 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 RRAGCQ9HB90 399 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 PICK1Q9NRD5 415 aa16.47■□□□□ 0.23
CACNB3-211ENST00000549226 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms