RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 C19orf81C9J6K1 198 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 CTGFP29279 349 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 MCMDC2Q4G0Z9 681 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 ERO1AQ96HE7 468 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.26■■□□□ 1.15
BRF1-214ENST00000549044 TAOK2Q9UL54 1235 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 TRIM17Q9Y577 477 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 ZSWIM8A7E2V4 1837 aa22.26■■□□□ 1.15
BRF1-214ENST00000549044 BCRP11274 1271 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 RASA1P20936 1047 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 TMEM179Q6ZVK1 233 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 TICAM2Q86XR7 235 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 FEZ1Q99689 392 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 NACAP1Q9BZK3 213 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 KIAA1683Q9H0B3 1180 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 NAPBQ9H115 298 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 ASCC2Q9H1I8 757 aaPredicted RBP22.25■■□□□ 1.15
BRF1-214ENST00000549044 TMOD4Q9NZQ9 345 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 TACC3Q9Y6A5 838 aa22.25■■□□□ 1.15
BRF1-214ENST00000549044 PRDM1O75626 825 aa22.24■■□□□ 1.15
BRF1-214ENST00000549044 LACTBP83111 547 aaPredicted RBP22.24■■□□□ 1.15
BRF1-214ENST00000549044 KIAA1755Q5JYT7 1200 aa22.24■■□□□ 1.15
BRF1-214ENST00000549044 USP17L2Q6R6M4 530 aa22.24■■□□□ 1.15
BRF1-214ENST00000549044 CCDC17Q96LX7 622 aa22.24■■□□□ 1.15
BRF1-214ENST00000549044 PEX10O60683 326 aa22.23■■□□□ 1.15
BRF1-214ENST00000549044 C12orf42Q96LP6 360 aa22.23■■□□□ 1.15
BRF1-214ENST00000549044 EFCC1Q9HA90 598 aa22.23■■□□□ 1.15
BRF1-214ENST00000549044 INCENPQ9NQS7 918 aa22.23■■□□□ 1.15
BRF1-214ENST00000549044 HSPD1P10809 573 aaKnown RBP22.22■■□□□ 1.15
BRF1-214ENST00000549044 PPARAQ07869 468 aa22.22■■□□□ 1.15
BRF1-214ENST00000549044 CWC27Q6UX04 472 aaKnown RBP22.22■■□□□ 1.15
BRF1-214ENST00000549044 SMCR8Q8TEV9 937 aaPredicted RBP22.22■■□□□ 1.15
BRF1-214ENST00000549044 P2RX7Q99572 595 aaKnown RBP22.22■■□□□ 1.15
BRF1-214ENST00000549044 IL25Q9H293 177 aa22.22■■□□□ 1.15
BRF1-214ENST00000549044 CCDC171Q6TFL3 1326 aa22.22■■□□□ 1.15
BRF1-214ENST00000549044 HOXA7P31268 230 aaPredicted RBP22.21■■□□□ 1.15
BRF1-214ENST00000549044 ICA1Q05084 483 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 CTDSPL2Q05D32 466 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 ALX1Q15699 326 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 POTEEQ6S8J3 1075 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 ANKRD13CQ8N6S4 541 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 TRIM47Q96LD4 638 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 MKNK2Q9HBH9 465 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 DIAPH3Q9NSV4 1193 aa22.21■■□□□ 1.15
BRF1-214ENST00000549044 MYH8P13535 1937 aa22.2■■□□□ 1.14
BRF1-214ENST00000549044 FGAP02671 866 aa22.2■■□□□ 1.14
BRF1-214ENST00000549044 VCAM1P19320 739 aa22.2■■□□□ 1.14
BRF1-214ENST00000549044 OSBPP22059 807 aa22.2■■□□□ 1.14
BRF1-214ENST00000549044 PABPC4Q13310 644 aaKnown RBP eCLIP22.2■■□□□ 1.14
BRF1-214ENST00000549044 PKN2Q16513 984 aaKnown RBP22.2■■□□□ 1.14
BRF1-214ENST00000549044 FBXO46Q6PJ61 603 aaPredicted RBP22.2■■□□□ 1.14
BRF1-214ENST00000549044 CENPQQ7L2Z9 268 aaPredicted RBP22.2■■□□□ 1.14
BRF1-214ENST00000549044 PNMA3Q9UL41 463 aa22.2■■□□□ 1.14
BRF1-214ENST00000549044 HPS5Q9UPZ3 1129 aa22.2■■□□□ 1.14
BRF1-214ENST00000549044 EEF2P13639 858 aaKnown RBP22.19■■□□□ 1.14
BRF1-214ENST00000549044 IRX3P78415 501 aaPredicted RBP22.19■■□□□ 1.14
BRF1-214ENST00000549044 PSMC4P43686 418 aa22.18■■□□□ 1.14
BRF1-214ENST00000549044 USP14P54578 494 aa22.18■■□□□ 1.14
BRF1-214ENST00000549044 ATP2B2Q01814 1243 aa22.18■■□□□ 1.14
BRF1-214ENST00000549044 PTPN22Q9Y2R2 807 aa22.18■■□□□ 1.14
BRF1-214ENST00000549044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.18■■□□□ 1.14
BRF1-214ENST00000549044 TMX2Q9Y320 296 aa22.18■■□□□ 1.14
BRF1-214ENST00000549044 GREB1LQ9C091 1923 aaPredicted RBP22.18■■□□□ 1.14
BRF1-214ENST00000549044 IGKV6D-41A0A0C4DH26 115 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 CCDC85CA6NKD9 419 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 HERVK_113P62684 666 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 KIF22Q14807 665 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 FAM47AQ5JRC9 791 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 RPAP3Q9H6T3 665 aaPredicted RBP22.17■■□□□ 1.14
BRF1-214ENST00000549044 KANSL2Q9H9L4 492 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 TXNRD2Q9NNW7 524 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 ANAPC4Q9UJX5 808 aa22.17■■□□□ 1.14
BRF1-214ENST00000549044 USP17L15C9J2P7 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L13C9JLJ4 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L11C9JVI0 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L18D6R9N7 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L22D6RA61 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L17D6RBQ6 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L19D6RCP7 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L20D6RJB6 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 HIP1O00291 1037 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 USP17L24Q0WX57 530 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 CATSPERGQ6ZRH7 1159 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 ZNF444Q8N0Y2 327 aaPredicted RBP22.16■■□□□ 1.14
BRF1-214ENST00000549044 SPICE1Q8N0Z3 855 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 NBPF3Q9H094 633 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 ARHGEF10LQ9HCE6 1279 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 PTCH2Q9Y6C5 1203 aa22.16■■□□□ 1.14
BRF1-214ENST00000549044 FMNL1O95466 1100 aaPredicted RBP22.15■■□□□ 1.14
BRF1-214ENST00000549044 CHMLP26374 656 aa22.15■■□□□ 1.14
BRF1-214ENST00000549044 GCLCP48506 637 aaPredicted RBP22.15■■□□□ 1.14
BRF1-214ENST00000549044 HAND2P61296 217 aa22.15■■□□□ 1.14
BRF1-214ENST00000549044 FAM110CQ1W6H9 321 aa22.15■■□□□ 1.14
BRF1-214ENST00000549044 NKX2-3Q8TAU0 364 aa22.15■■□□□ 1.14
BRF1-214ENST00000549044 VCPKMTQ9H867 229 aa22.15■■□□□ 1.14
BRF1-214ENST00000549044 RBPJLQ9UBG7 517 aa22.15■■□□□ 1.14
BRF1-214ENST00000549044 TFAP4Q01664 338 aa22.14■■□□□ 1.13
BRF1-214ENST00000549044 PDE4BQ07343 736 aa22.14■■□□□ 1.13
BRF1-214ENST00000549044 CEP95Q96GE4 821 aa22.14■■□□□ 1.13
BRF1-214ENST00000549044 CCDC136Q96JN2 1154 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms