RNA–Protein interactions for RNA: ENST00000548965.1

TMEM106C-210, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-210ENST00000548965 LACTBP83111 547 aaPredicted RBP10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 CAP1Q01518 475 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 NMIQ13287 307 aaPredicted RBP10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 PABPC4Q13310 644 aaKnown RBP eCLIP10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 SEPT2Q15019 361 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 SH3D19Q5HYK7 790 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 GIMAP6Q6P9H5 292 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 C17orf99Q6UX52 265 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 TMEM179Q6ZVK1 233 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 NACAP1Q9BZK3 213 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 ARHGAP39Q9C0H5 1083 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 NAPBQ9H115 298 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 OSBPL3Q9H4L5 887 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 EFCC1Q9HA90 598 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
TMEM106C-210ENST00000548965 CCDC85CA6NKD9 419 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 FOXP2O15409 715 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 IRX3P78415 501 aaPredicted RBP10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 ICA1Q05084 483 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 KIF22Q14807 665 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 PKN2Q16513 984 aaKnown RBP10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 SBK1Q52WX2 424 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 FBXO46Q6PJ61 603 aaPredicted RBP10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L2Q6R6M4 530 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 IFNL3Q8IZI9 196 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 ACER1Q8TDN7 264 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 ASCC2Q9H1I8 757 aaPredicted RBP10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 DIAPH3Q9NSV4 1193 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 HPS5Q9UPZ3 1129 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 CCDC171Q6TFL3 1326 aa10.27□□□□□ -0.77
TMEM106C-210ENST00000548965 MKI67P46013 3256 aaKnown RBP10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 C19orf81C9J6K1 198 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 PATL2C9JE40 543 aaKnown RBP10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 BCRP11274 1271 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 VCAM1P19320 739 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 OSBPP22059 807 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 TTC22Q5TAA0 569 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 VPS53Q5VIR6 699 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 ZNF589Q86UQ0 364 aaPredicted RBP10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 C12orf42Q96LP6 360 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 HELLSQ9NRZ9 838 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 EMILIN3Q9NT22 766 aa10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 KIAA0100Q14667 2235 aaKnown RBP10.26□□□□□ -0.77
TMEM106C-210ENST00000548965 A0A1W2PRG0 241 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 PRDM1O75626 825 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 SDSP20132 328 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 RASA1P20936 1047 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 CTGFP29279 349 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 USP14P54578 494 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 FCGRTP55899 365 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 ATP2B2Q01814 1243 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 PPARAQ07869 468 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 ARHGEF6Q15052 776 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 FAM110CQ1W6H9 321 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 MCMDC2Q4G0Z9 681 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 ANKRD13CQ8N6S4 541 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 TRIM47Q96LD4 638 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 CCDC17Q96LX7 622 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 SH2D4AQ9H788 454 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 MKNK2Q9HBH9 465 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 ARHGEF10LQ9HCE6 1279 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 PTPN22Q9Y2R2 807 aa10.25□□□□□ -0.77
TMEM106C-210ENST00000548965 ZNF236Q9UL36 1845 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 FMNL1O95466 1100 aaPredicted RBP10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 SLC3A2P08195 630 aaKnown RBP10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 PSMC4P43686 418 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 GCLCP48506 637 aaPredicted RBP10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 HERVK_113P62684 666 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 CWC27Q6UX04 472 aaKnown RBP10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 TICAM2Q86XR7 235 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 TANGO6Q9C0B7 1094 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 RPAP3Q9H6T3 665 aaPredicted RBP10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 ZNF287Q9HBT7 754 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 PTCH2Q9Y6C5 1203 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 MYPNQ86TC9 1320 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 PLIN4Q96Q06 1357 aa10.24□□□□□ -0.77
TMEM106C-210ENST00000548965 FRMPD3Q5JV73 1810 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 PLXNA1Q9UIW2 1896 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 HIP1O00291 1037 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 TNPO2O14787 897 aaKnown RBP10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 RAD21O60216 631 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 PEX10O60683 326 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 NEFLP07196 543 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 EEF2P13639 858 aaKnown RBP10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 MFAP1P55081 439 aaKnown RBP10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 SOX10P56693 466 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 CTDSPL2Q05D32 466 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 PDE4BQ07343 736 aa10.23□□□□□ -0.77
TMEM106C-210ENST00000548965 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms